Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AL356535.1-201ENST00000440335 398 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 MRPS17P3-201ENST00000465453 385 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 HSPE1P6-201ENST00000479457 291 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC069499.1-201ENST00000489433 509 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 RPL23AP55-201ENST00000498163 452 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 RPS27AP13-201ENST00000498403 237 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AP003730.1-201ENST00000524605 285 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC118273.2-201ENST00000532092 465 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 OR5AL2P-201ENST00000532185 920 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 MIR5684-201ENST00000585074 65 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC008752.3-201ENST00000588113 712 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 BDH2P1-201ENST00000602288 736 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 HMGB1P50-201ENST00000605814 607 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AL020991.1-201ENST00000612314 373 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC004696.1-201ENST00000614345 607 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC093648.1-201ENST00000623546 606 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 SDAD1P2-201ENST00000441308 2028 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 DEFB108F-201ENST00000344638 222 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 Y_RNA.38-201ENST00000362617 102 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RNU6-996P-201ENST00000365438 107 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 SNORA36C-201ENST00000384289 132 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RNU6-908P-201ENST00000410160 94 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 Y_RNA.604-201ENST00000410574 102 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL358472.1-201ENST00000431295 329 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC087650.1-201ENST00000431445 468 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ATP5JP1-201ENST00000431631 322 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 GTF2IP20-201ENST00000431663 360 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ATP5HP2-201ENST00000433885 485 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 NUTF2P3-201ENST00000448540 384 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RPS29P15-201ENST00000458329 171 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC092451.1-201ENST00000480211 153 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC233702.1-201ENST00000482905 502 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC106872.2-201ENST00000494303 480 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 RNU6-835P-201ENST00000516974 104 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL355836.1-201ENST00000555951 870 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 MIR4697-201ENST00000582977 78 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 MIR3138-201ENST00000585238 82 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL355810.1-201ENST00000614629 552 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL008636.1-201ENST00000625038 1018 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 MIR3662-201ENST00000637030 95 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AC099654.14-201ENST00000638599 341 ntBASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRIM54Q9BYV2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC006020.1-201ENST00000420179 1854 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms