Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 MTND5P26-201ENST00000426018 1752 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 RNU5A-1-201ENST00000362698 116 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 RNU4-1-201ENST00000363925 141 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 RHOT1P2-201ENST00000366423 333 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC110754.1-201ENST00000399740 601 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 RNU6-648P-201ENST00000410190 107 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 BX295541.1-201ENST00000417774 250 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC104850.1-201ENST00000435940 476 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC140076.1-201ENST00000449897 361 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 MTCO3P20-201ENST00000454926 688 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC011825.1-201ENST00000484967 388 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 NIPA2P2-201ENST00000496376 1083 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 HMGB1P29-201ENST00000505659 499 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 RNU7-51P-201ENST00000516560 62 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AP003072.2-201ENST00000527756 676 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC007424.1-203ENST00000554613 687 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 OR4H12P-201ENST00000556269 907 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL606834.2-201ENST00000602954 668 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL592295.2-201ENST00000612578 206 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC138649.3-201ENST00000622154 254 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL732618.1-201ENST00000623251 301 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AC099654.12-201ENST00000639868 649 ntBASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RTFDC1Q9BY42 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 GSTA9P-201ENST00000406231 611 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 RNA5SP39-201ENST00000411245 120 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 DBIP2-201ENST00000419076 262 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 USP9YP36-201ENST00000424581 829 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC017083.1-201ENST00000428093 483 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL356867.1-201ENST00000429623 299 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 RPL31P35-201ENST00000431058 377 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 HMGB1P12-201ENST00000438594 598 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL662791.1-201ENST00000441992 928 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC079781.2-201ENST00000446424 169 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC022364.2-201ENST00000457963 554 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 RPL21P10-201ENST00000463521 490 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC092451.1-201ENST00000480211 153 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC022880.1-201ENST00000534017 973 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC008011.1-201ENST00000545989 227 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC123904.3-201ENST00000547218 814 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 MED28P6-201ENST00000558776 231 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 MIR3690-201ENST00000580266 75 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.6-201ENST00000603753 252 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC008162.1-201ENST00000604718 254 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.1-201ENST00000604752 252 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.5-201ENST00000605253 252 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.8-201ENST00000605353 252 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AL670379.7-201ENST00000605823 252 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC098614.4-201ENST00000607601 462 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 SDR42E1P2-201ENST00000614861 481 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 uc_338.32-201ENST00000615087 172 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 OR5AK4P-201ENST00000635912 903 ntBASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
RTFDC1Q9BY42 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTFDC1Q9BY42 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTFDC1Q9BY42 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RTFDC1Q9BY42 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms