Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MIR3944-201ENST00000581277 108 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.58□□□□□ -2
CHRDL1Q9BU40 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHRDL1Q9BU40 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.58□□□□□ -2
CHRDL1Q9BU40 AC009464.1-201ENST00000615731 469 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 AC084757.4-201ENST00000616350 526 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 AL136981.2-201ENST00000617319 734 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 AC009268.2-201ENST00000621925 457 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.58□□□□□ -2
CHRDL1Q9BU40 AC097520.1-201ENST00000624435 385 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 AC103706.2-201ENST00000638080 240 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHRDL1Q9BU40 MTND5P19-201ENST00000424872 1794 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CHRDL1Q9BU40 DDX10P1-201ENST00000448545 1933 ntBASIC2.58□□□□□ -2
CHRDL1Q9BU40 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 MIR208A-201ENST00000362287 71 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 SNORA63.1-201ENST00000362493 131 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RNU1-70P-201ENST00000362618 164 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RNA5SP387-201ENST00000364226 106 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RNU6-217P-201ENST00000384164 104 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RNU6-1207P-201ENST00000384343 107 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 MIR490-201ENST00000384865 128 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL356057.2-201ENST00000403318 432 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 BX119904.4-201ENST00000424402 301 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC006946.1-201ENST00000429106 328 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL117351.1-201ENST00000438864 766 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 RPL23AP20-201ENST00000447965 421 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RSL24D1P3-201ENST00000449255 495 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC104563.1-201ENST00000476147 376 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 RPL23AP70-201ENST00000483361 460 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC021382.1-201ENST00000483523 359 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 APOOP4-201ENST00000513530 597 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC105185.1-201ENST00000518705 535 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 HMGN1P28-201ENST00000521340 364 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CHRDL1Q9BU40 CCNG2P1-201ENST00000549521 1000 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL355877.2-201ENST00000603670 358 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL592221.1-201ENST00000605266 382 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC112220.3-201ENST00000605502 502 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 uc_338.1-201ENST00000612113 180 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AL356321.1-201ENST00000621360 228 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC079228.1-201ENST00000624774 1049 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 AC104454.1-201ENST00000421341 1401 ntBASIC2.57□□□□□ -2
CHRDL1Q9BU40 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.57□□□□□ -2
CHRDL1Q9BU40 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHRDL1Q9BU40 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHRDL1Q9BU40 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 RNA5SP50-201ENST00000363731 107 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 RNU6-289P-201ENST00000364093 107 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 RNU6-777P-201ENST00000364265 104 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 SNORA23-201ENST00000365128 182 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 SET-203ENST00000372688 801 ntTSL 2 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CHRDL1Q9BU40 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHRDL1Q9BU40 SNORA46-201ENST00000384762 135 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 RNA5SP344-201ENST00000411081 104 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC245054.2-201ENST00000415639 319 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL139281.1-201ENST00000422120 335 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL953862.1-201ENST00000423016 168 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 GTF2IP20-201ENST00000431663 360 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL354941.1-201ENST00000438600 464 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL008629.1-201ENST00000438615 184 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 MTND5P14-201ENST00000441481 1267 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC115115.1-201ENST00000449927 248 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 RPL23AP35-201ENST00000451906 501 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 ATG12P2-201ENST00000456830 416 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 MTND2P14-201ENST00000482139 351 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC098799.2-201ENST00000509466 868 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
CHRDL1Q9BU40 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.56□□□□□ -2
CHRDL1Q9BU40 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms