Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MTND6P33-201ENST00000571794 183 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 MIR1254-2-201ENST00000579553 63 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL160290.3-201ENST00000604869 165 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL034351.1-201ENST00000605288 668 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 CTHRC1P1-201ENST00000605383 469 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AL022345.1-201ENST00000607292 135 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 TUG1_2.1-201ENST00000614234 87 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 SNHG22-203ENST00000617833 660 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 uc_338.11-201ENST00000619132 160 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC090971.5-201ENST00000621102 293 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC011155.2-201ENST00000623202 216 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 U6.114-201ENST00000636407 96 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC104118.1-201ENST00000607625 1589 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.13□□□□□ -1.75
NDC1Q9BTX1 GABPAP-201ENST00000419271 1356 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 MTND4P27-201ENST00000450813 1354 ntBASIC4.13□□□□□ -1.75
NDC1Q9BTX1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNU6-1155P-201ENST00000363554 107 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNU6-960P-201ENST00000364056 120 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNU6-188P-201ENST00000364207 107 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNU1-132P-201ENST00000364300 164 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 U3.12-201ENST00000364498 214 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SNORA70C-201ENST00000384538 135 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 MIR135A2-201ENST00000384854 100 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.579-201ENST00000390939 94 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RPS26P8-201ENST00000393490 348 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC114491.1-201ENST00000416095 246 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 HMGB3P11-201ENST00000440127 604 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 PRPS1P1-201ENST00000445305 876 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AL162389.1-201ENST00000449233 177 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SNRPFP3-201ENST00000457792 225 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RPL35AP15-201ENST00000468042 339 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 RNU4-60P-201ENST00000517239 135 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 TRMT10BP1-201ENST00000519377 943 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC109635.4-202ENST00000531666 412 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC126177.3-201ENST00000551839 688 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AL352979.3-201ENST00000553515 247 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC074050.1-201ENST00000563247 211 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC024619.4-201ENST00000580924 316 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 POLR3GP2-201ENST00000588366 668 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AL022099.1-201ENST00000604551 712 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC012443.1-201ENST00000605605 231 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 uc_338.15-201ENST00000615470 191 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AL445567.2-201ENST00000618935 498 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 MIR7154-201ENST00000620673 73 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC243312.2-201ENST00000623340 601 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 MIR6715B-201ENST00000637172 77 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 EXOC5P1-201ENST00000510543 1969 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 BDP1P-201ENST00000582658 1990 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 AC116667.1-201ENST00000604855 2072 ntBASIC4.12□□□□□ -1.75
NDC1Q9BTX1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDC1Q9BTX1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RNA5SP22-201ENST00000365393 109 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RNA5SP151-201ENST00000365632 117 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RNU6-43P-201ENST00000384302 107 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 Y_RNA.530-201ENST00000384587 101 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 SNORA57.1-201ENST00000391227 145 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 UBE2V1P2-201ENST00000397758 440 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AL359634.1-202ENST00000404721 284 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RN7SKP27-201ENST00000410684 333 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 MTCO3P45-201ENST00000443036 613 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.11□□□□□ -1.75
NDC1Q9BTX1 RNU7-66P-201ENST00000459469 62 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC008481.1-201ENST00000463278 396 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC083904.1-201ENST00000487828 231 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.11□□□□□ -1.75
NDC1Q9BTX1 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms