Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX2Q99626 MTCO1P48-201ENST00000448024 1096 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 CACYBPP2-201ENST00000453625 678 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX2Q99626 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AC005840.1-201ENST00000498412 377 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 DYNLL1P6-201ENST00000503440 264 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX2Q99626 AC108078.2-201ENST00000510750 236 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AC104986.1-201ENST00000517978 436 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.47□□□□□ -2.01
CDX2Q99626 MTCO3P15-201ENST00000526563 574 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX2Q99626 AL133271.1-201ENST00000538229 291 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 NDUFA5P6-201ENST00000542110 379 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX2Q99626 DNAJC8P1-201ENST00000554535 372 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 MTCYBP27-201ENST00000555160 670 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AC126365.2-201ENST00000580630 379 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 AP001542.2-201ENST00000593141 364 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX2Q99626 ZNF663P-202ENST00000641770 1131 ntBASIC2.47□□□□□ -2.01
CDX2Q99626 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDX2Q99626 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.47□□□□□ -2.01
CDX2Q99626 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
CDX2Q99626 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDX2Q99626 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDX2Q99626 RNU6-1027P-201ENST00000383998 107 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 SNORD51-201ENST00000384320 80 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC016769.3-201ENST00000396562 315 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AL603865.2-201ENST00000401679 213 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AL023284.1-201ENST00000403956 276 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 Z82205.1-201ENST00000428456 297 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 GAPDHP27-201ENST00000447427 1020 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC233279.1-201ENST00000455300 423 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 RPS20P24-201ENST00000457473 361 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC055855.1-201ENST00000489563 579 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 FAM92A1P2-202ENST00000504766 877 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 RNU6-27P-201ENST00000516146 107 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX2Q99626 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDX2Q99626 AC104417.1-201ENST00000523974 751 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AC022690.1-201ENST00000526681 550 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX2Q99626 CYB5AP5-201ENST00000549779 389 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.46□□□□□ -2.02
CDX2Q99626 BNIP3P39-201ENST00000601077 554 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AC024933.1-201ENST00000608472 348 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AC092650.2-201ENST00000619984 902 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX2Q99626 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.46□□□□□ -2.02
CDX2Q99626 AC087821.2-201ENST00000637086 450 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
CDX2Q99626 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX2Q99626 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX2Q99626 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDX2Q99626 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDX2Q99626 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 MIR506-201ENST00000384998 124 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 SNORD65.1-201ENST00000390889 71 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 RPL19P1-201ENST00000411635 428 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC092447.6-201ENST00000414578 210 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 Z96811.1-201ENST00000445880 108 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 AP004217.1-201ENST00000480579 346 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC106872.3-201ENST00000495104 446 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC105914.1-201ENST00000511798 226 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 TRMT112P2-201ENST00000512910 132 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.45□□□□□ -2.02
CDX2Q99626 HSPE1P20-201ENST00000538133 289 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC125611.1-201ENST00000549563 229 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC125611.2-201ENST00000551907 647 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.45□□□□□ -2.02
CDX2Q99626 AC006116.7-201ENST00000590141 756 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AP001521.1-201ENST00000609150 300 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC124016.2-201ENST00000610058 665 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC002076.2-201ENST00000617362 122 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AL512427.1-201ENST00000618593 349 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC018755.4-201ENST00000619715 454 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC091925.2-201ENST00000625059 256 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AL138960.2-201ENST00000625145 535 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.45□□□□□ -2.02
CDX2Q99626 LRRC77P-213ENST00000637727 880 ntBASIC2.45□□□□□ -2.02
CDX2Q99626 GDI2P1-201ENST00000429312 1336 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CDX2Q99626 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDX2Q99626 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX2Q99626 RNU6-1066P-201ENST00000363573 105 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 RNU1-100P-201ENST00000365255 165 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms