Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 S100A11P1-201ENST00000477525 312 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS29P19-201ENST00000479709 171 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC091885.1-201ENST00000506658 268 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC021146.1-201ENST00000511202 716 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC022790.1-201ENST00000522872 204 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AP003072.2-201ENST00000527756 676 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC025884.1-201ENST00000556034 378 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 SULT1C2P1-202ENST00000562418 459 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 OR4K8P-201ENST00000578842 1048 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC243654.2-201ENST00000612843 443 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AL157817.1-201ENST00000614264 790 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AC007485.1-201ENST00000616755 206 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 SAGE2P-201ENST00000420011 2126 ntBASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP1Q96SZ6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.100-201ENST00000363141 102 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU5E-8P-201ENST00000363502 116 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AL022722.2-201ENST00000402519 180 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-193P-201ENST00000410977 107 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 CBX1P4-201ENST00000439415 457 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC005297.2-201ENST00000450430 606 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 TRBVA-201ENST00000498804 316 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC092436.1-201ENST00000506450 503 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC104136.1-201ENST00000512969 394 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 RNU6-864P-201ENST00000516256 108 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC008562.1-201ENST00000521763 330 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC128657.1-201ENST00000549459 145 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 MIR5583-1-201ENST00000580941 59 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC022893.3-201ENST00000607665 437 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 AC008013.2-202ENST00000637965 364 ntBASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK5RAP1Q96SZ6 CDC27P3-201ENST00000635418 1910 ntBASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 MTND5P19-201ENST00000424872 1794 ntBASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.4□□□□□ -1.7
CDK5RAP1Q96SZ6 Y_RNA.5-201ENST00000362334 102 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU1-108P-201ENST00000362556 161 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 SET-203ENST00000372688 801 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 MT-TG-201ENST00000387429 68 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC016769.3-201ENST00000396562 315 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL7P60-201ENST00000397636 735 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 UBE2V1P2-201ENST00000397758 440 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC004975.1-201ENST00000428733 208 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RPS24P8-201ENST00000431490 402 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 MTND1P9-201ENST00000453775 944 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC103987.1-201ENST00000473394 348 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 VWA8P1-201ENST00000510889 176 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RN7SKP24-201ENST00000515888 284 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms