Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 COX6CP12-201ENST00000446748 202 ntBASIC2.29□□□□□ -2.04
IFT140Q96RY7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 FABP5P5-201ENST00000515537 406 ntBASIC2.29□□□□□ -2.04
IFT140Q96RY7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.29□□□□□ -2.04
IFT140Q96RY7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
IFT140Q96RY7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
IFT140Q96RY7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
IFT140Q96RY7 SNORD114-27-201ENST00000363766 70 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AL356057.2-201ENST00000403318 432 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 PSMA2P3-201ENST00000429685 675 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AL353898.1-201ENST00000444055 238 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC022634.1-201ENST00000520765 532 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC025755.1-201ENST00000521306 278 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC011712.1-201ENST00000588959 234 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.28□□□□□ -2.04
IFT140Q96RY7 AL391646.1-201ENST00000603860 190 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC016727.2-201ENST00000603988 621 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC015849.6-201ENST00000605454 474 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 RNA5SP108-201ENST00000605921 117 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.28□□□□□ -2.04
IFT140Q96RY7 AC006065.5-201ENST00000623427 349 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 MIR203B-201ENST00000636080 86 ntBASIC2.28□□□□□ -2.04
IFT140Q96RY7 ZNF734P-201ENST00000419494 1534 ntBASIC2.28□□□□□ -2.05
IFT140Q96RY7 TPMTP3-201ENST00000411928 735 ntBASIC2.27□□□□□ -2.05
IFT140Q96RY7 RPS12P24-201ENST00000412619 387 ntBASIC2.27□□□□□ -2.05
IFT140Q96RY7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.27□□□□□ -2.05
IFT140Q96RY7 AC093767.1-201ENST00000504523 156 ntBASIC2.27□□□□□ -2.05
IFT140Q96RY7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.27□□□□□ -2.05
IFT140Q96RY7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
IFT140Q96RY7 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
IFT140Q96RY7 MIR3690-201ENST00000580266 75 ntBASIC2.27□□□□□ -2.05
IFT140Q96RY7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.27□□□□□ -2.05
IFT140Q96RY7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC019131.2-201ENST00000609071 870 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC103710.2-202ENST00000641454 2853 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
IFT140Q96RY7 MIR222-201ENST00000384992 110 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 MT-TP-201ENST00000387461 68 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC092447.6-201ENST00000414578 210 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AL357078.2-201ENST00000416486 427 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 RPS26P56-201ENST00000444468 240 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 MTATP6P22-201ENST00000507369 598 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
IFT140Q96RY7 AC138915.1-201ENST00000565427 1685 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
IFT140Q96RY7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
IFT140Q96RY7 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
IFT140Q96RY7 Z85995.1-201ENST00000415547 335 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.25□□□□□ -2.05
IFT140Q96RY7 snoU13.3-201ENST00000459441 104 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 AP005435.4-201ENST00000529514 284 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.25□□□□□ -2.05
IFT140Q96RY7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.25□□□□□ -2.05
IFT140Q96RY7 DNAJC8P1-201ENST00000554535 372 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 AC005730.3-201ENST00000583067 366 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
IFT140Q96RY7 AC112503.2-201ENST00000609005 552 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.25□□□□□ -2.05
IFT140Q96RY7 AC006329.2-201ENST00000611491 394 ntBASIC2.25□□□□□ -2.05
IFT140Q96RY7 PGBD4P3-201ENST00000440731 581 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.24□□□□□ -2.05
IFT140Q96RY7 RBM43P1-201ENST00000476891 1081 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.24□□□□□ -2.05
IFT140Q96RY7 MTCO2P9-201ENST00000503214 694 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.24□□□□□ -2.05
IFT140Q96RY7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC109446.2-201ENST00000567872 497 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 AC013553.2-201ENST00000604244 589 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 uc_338.9-201ENST00000617424 182 ntBASIC2.24□□□□□ -2.05
IFT140Q96RY7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
IFT140Q96RY7 SNRPEP2-201ENST00000397592 279 ntBASIC2.23□□□□□ -2.05
IFT140Q96RY7 RNA5SP364-201ENST00000516938 78 ntBASIC2.23□□□□□ -2.05
IFT140Q96RY7 AL713998.2-201ENST00000604538 1198 ntBASIC2.23□□□□□ -2.05
IFT140Q96RY7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.23□□□□□ -2.05
IFT140Q96RY7 AP003122.6-201ENST00000623831 495 ntBASIC2.23□□□□□ -2.05
IFT140Q96RY7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.23□□□□□ -2.05
IFT140Q96RY7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
IFT140Q96RY7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.23□□□□□ -2.05
IFT140Q96RY7 Y_RNA.205-201ENST00000364128 113 ntBASIC2.22□□□□□ -2.05
IFT140Q96RY7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.22□□□□□ -2.05
IFT140Q96RY7 MORF4L1P7-201ENST00000426038 703 ntBASIC2.22□□□□□ -2.05
IFT140Q96RY7 MTCYBP12-201ENST00000440559 1134 ntBASIC2.22□□□□□ -2.05
IFT140Q96RY7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.22□□□□□ -2.05
IFT140Q96RY7 AP000907.2-201ENST00000530827 353 ntBASIC2.22□□□□□ -2.05
IFT140Q96RY7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.22□□□□□ -2.05
IFT140Q96RY7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.22□□□□□ -2.05
IFT140Q96RY7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms