Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 SNORA63.1-201ENST00000362493 131 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-562P-201ENST00000362731 107 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 Y_RNA.473-201ENST00000384333 102 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 MIR659-201ENST00000384963 97 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RN7SKP202-201ENST00000410439 330 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 SNAP23P1-201ENST00000433229 246 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC016696.1-201ENST00000446949 318 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 FABP5P13-201ENST00000452144 328 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RPL21P126-201ENST00000470049 478 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RPL21P93-201ENST00000480465 489 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RN7SL809P-201ENST00000482040 297 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 MRPS35P2-201ENST00000508242 191 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 RANP3-201ENST00000530970 276 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AC024619.4-201ENST00000580924 316 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 AL445567.2-201ENST00000618935 498 ntBASIC5.23□□□□□ -1.57
SYNGAP1Q96PV0 ZNF519P1-201ENST00000449011 1626 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 RNU6-550P-201ENST00000391057 101 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 EIF4HP2-201ENST00000424380 563 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 RPL36AP13-201ENST00000457490 317 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 RBBP4P6-201ENST00000508098 202 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 SNORA74D-201ENST00000516404 141 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 IGLVIV-65-201ENST00000517313 360 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC023442.1-201ENST00000531247 422 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 AC114781.5-201ENST00000615297 108 ntBASIC5.22□□□□□ -1.57
SYNGAP1Q96PV0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 MTND5P30-201ENST00000452896 1731 ntBASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
SYNGAP1Q96PV0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 Z95327.2-201ENST00000414579 1873 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-99P-201ENST00000364721 107 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 SET-203ENST00000372688 801 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RNA5SP111-201ENST00000411386 101 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC018865.2-201ENST00000423631 129 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RPS29P17-201ENST00000430795 166 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC092013.1-201ENST00000438795 332 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 MRPL48P1-201ENST00000445390 636 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 SNORD97-201ENST00000459187 142 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RPL5P30-201ENST00000465511 891 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC053481.1-201ENST00000467217 306 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC128713.1-201ENST00000471495 306 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC079140.5-201ENST00000507882 310 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-1016P-201ENST00000516689 94 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 RNU1-54P-201ENST00000517181 120 ntBASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.21□□□□□ -1.58
SYNGAP1Q96PV0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms