Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.22□□□□□ -1.89
PRICKLE1Q96MT3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRICKLE1Q96MT3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.21□□□□□ -1.89
PRICKLE1Q96MT3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 OR1S2-201ENST00000302592 978 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AL035410.1-201ENST00000427409 427 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC108734.1-201ENST00000439549 399 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 ARPC3P5-201ENST00000448802 534 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 USP9YP34-201ENST00000453983 808 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 MTCO2P18-201ENST00000457151 658 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 PABPC1P3-201ENST00000469174 459 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 Y_RNA.695-201ENST00000516715 107 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC024909.2-201ENST00000553035 286 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC087481.2-201ENST00000565492 330 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AP001004.1-201ENST00000582468 324 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 U73023.1-201ENST00000603134 700 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 XIAPP1-201ENST00000603162 600 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC064872.1-201ENST00000604823 1072 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC107214.2-201ENST00000608204 634 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC009318.4-201ENST00000620496 486 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 AC099506.2-201ENST00000623074 221 ntBASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRICKLE1Q96MT3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 Z92545.1-201ENST00000411782 234 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 RPL23AP74-201ENST00000437246 471 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AP000936.2-201ENST00000447151 681 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 RPL27AP5-201ENST00000469428 449 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 RPS29P2-201ENST00000479278 136 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC090453.1-201ENST00000495560 436 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC093767.1-201ENST00000504523 156 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 SNORA31.8-201ENST00000516327 108 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 HSPA8P13-201ENST00000523715 472 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 OR6C7P-201ENST00000547875 934 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 PCMTD1P2-201ENST00000565017 355 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 COX6CP3-201ENST00000580869 223 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 MIR6076-201ENST00000617521 113 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 CYP3A51P-201ENST00000633513 256 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 AC084035.1-201ENST00000634543 607 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 MTND4P16-201ENST00000466108 1367 ntBASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PRICKLE1Q96MT3 GDI2P1-201ENST00000429312 1336 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 PABPC1P9-201ENST00000426076 1612 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 RPL23AP57-201ENST00000332361 466 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 MIR422A-201ENST00000362286 90 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 RNU6-989P-201ENST00000362756 107 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 U3.4-201ENST00000363352 213 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 RNU6-501P-201ENST00000364072 100 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 RNU6-777P-201ENST00000364265 104 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 SNORA51.4-201ENST00000364993 124 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 RNU6-730P-201ENST00000383954 104 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 MTND4LP20-201ENST00000402379 270 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 TPMTP2-201ENST00000414372 726 ntBASIC3.19□□□□□ -1.9
PRICKLE1Q96MT3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms