Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC027309.2-201ENST00000520566 192 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC087894.1-201ENST00000538359 518 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC092451.2-201ENST00000538746 658 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 MIR4529-201ENST00000578110 78 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AL022067.1-201ENST00000602426 454 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 AC090772.4-201ENST00000623599 362 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
PKNOX2Q96KN3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 MTND4P1-201ENST00000457501 1466 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 RNU6-1300P-201ENST00000391046 108 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL512604.1-201ENST00000404812 257 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 RNA5SP338-201ENST00000410495 85 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL139413.1-201ENST00000421309 217 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 NIPA2P5-201ENST00000452282 464 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC105252.1-201ENST00000503089 286 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 SNORA31.25-201ENST00000517242 134 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC104417.1-201ENST00000523974 751 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC010186.2-204ENST00000537668 439 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 CYCSP2-201ENST00000558168 301 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC087465.1-201ENST00000560574 245 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC099785.1-201ENST00000605697 437 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL583856.2-201ENST00000606298 543 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AL157770.1-201ENST00000623049 439 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 AC087821.2-201ENST00000637086 450 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 U6.105-201ENST00000637379 88 ntBASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PKNOX2Q96KN3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 SNORA71.1-201ENST00000364523 117 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AL603865.2-201ENST00000401679 213 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 BTF3P8-201ENST00000414577 526 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 ZNF90P2-204ENST00000419323 1075 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 SUMO2P6-201ENST00000505273 288 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 SAP18P1-201ENST00000512058 390 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 RNA5SP364-201ENST00000516938 78 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC009812.2-201ENST00000517657 457 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 PSMA2P1-201ENST00000526365 646 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 MTCO3P15-201ENST00000526563 574 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC118273.2-201ENST00000532092 465 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC123904.3-201ENST00000547218 814 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 LARP7P2-201ENST00000575306 125 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 MIR4287-201ENST00000579398 78 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC012493.3-201ENST00000604494 112 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 AC109454.4-201ENST00000623411 649 ntBASIC2.78□□□□□ -1.96
PKNOX2Q96KN3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNA5SP68-201ENST00000363885 119 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNA5SP138-201ENST00000365098 114 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 MIR134-201ENST00000385258 73 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 MIR147B-201ENST00000390185 80 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RN7SKP27-201ENST00000410684 333 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RNU2-15P-201ENST00000410692 191 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 LUZP4P1-201ENST00000415420 344 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AL050321.1-201ENST00000432363 400 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RPL35AP22-201ENST00000436855 335 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 ATG12P2-201ENST00000456830 416 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 MTCO1P42-201ENST00000457379 726 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC080013.2-201ENST00000460866 323 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 AC006445.1-201ENST00000491925 405 ntBASIC2.77□□□□□ -1.97
PKNOX2Q96KN3 RN7SL504P-201ENST00000494496 287 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms