Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 SNORD108-201ENST00000459332 71 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 RPL30P6-201ENST00000475925 342 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 MIR4506-201ENST00000584693 77 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 SNORA50A-202ENST00000629536 136 ntBASIC1.34□□□□□ -2.2
TTC28Q96AY4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.34□□□□□ -2.2
TTC28Q96AY4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 MIR124-3-201ENST00000384866 87 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC016769.3-201ENST00000396562 315 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 TRGV6-201ENST00000417928 299 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 RNU1-40P-201ENST00000516816 164 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 RNU1-97P-201ENST00000516872 164 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 HSPE1P3-201ENST00000559254 309 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC009127.3-201ENST00000570531 403 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC006270.2-201ENST00000578523 652 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 MIR4512-201ENST00000583257 77 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AP001029.3-201ENST00000588063 596 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC073348.1-201ENST00000623002 331 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
TTC28Q96AY4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TTC28Q96AY4 Y_RNA.518-201ENST00000384552 113 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 AP002371.1-201ENST00000463604 433 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC023050.1-201ENST00000498198 304 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 LRRC34P2-201ENST00000514850 553 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TTC28Q96AY4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC104229.1-201ENST00000561364 255 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 MIR4458-201ENST00000578872 75 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.33□□□□□ -2.2
TTC28Q96AY4 ABI1P1-201ENST00000603375 1120 ntBASIC1.33□□□□□ -2.2
TTC28Q96AY4 RNU6-461P-201ENST00000364195 107 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 CYCSP33-201ENST00000414485 327 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AL512504.1-201ENST00000415494 778 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC073464.3-201ENST00000422564 712 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 RPL27AP8-201ENST00000424277 446 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
TTC28Q96AY4 MTATP6P22-201ENST00000507369 598 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 MIR924-201ENST00000638017 53 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 RNU2-37P-201ENST00000410695 177 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC025423.2-201ENST00000537570 439 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 AC091488.1-201ENST00000604239 660 ntBASIC1.32□□□□□ -2.2
TTC28Q96AY4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.32□□□□□ -2.2
TTC28Q96AY4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TTC28Q96AY4 SNORA26.7-201ENST00000391288 122 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 AL445669.1-201ENST00000426743 755 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 GTF2IP9-201ENST00000502460 301 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 EEF1B2P4-201ENST00000551398 348 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TTC28Q96AY4 AC111188.2-201ENST00000529697 1387 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 AC092832.1-201ENST00000422934 400 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 RPS27P5-201ENST00000444247 244 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 RNA5SP384-201ENST00000516615 116 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TTC28Q96AY4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TTC28Q96AY4 ZNF33CP-201ENST00000432492 2030 ntBASIC1.31□□□□□ -2.2
TTC28Q96AY4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.31□□□□□ -2.2
TTC28Q96AY4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TTC28Q96AY4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
TTC28Q96AY4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 RNU11-2P-201ENST00000516898 142 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 SMARCE1P4-201ENST00000523647 241 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC005498.1-201ENST00000592125 465 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 MIR6513-201ENST00000621188 64 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC010487.4-201ENST00000637027 61 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
TTC28Q96AY4 RNF6P1-201ENST00000444889 1784 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TTC28Q96AY4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 RPL31P52-201ENST00000407532 367 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 HMGN2P20-201ENST00000437531 273 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms