Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 PMCHL2-203ENST00000457791 237 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 RPS20P20-201ENST00000460498 340 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 RPL21P11-201ENST00000461458 483 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC007537.2-201ENST00000472093 511 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC078785.3-201ENST00000476607 425 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 RPL39P36-201ENST00000490784 156 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC110792.1-201ENST00000491826 472 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 HMGN1P12-201ENST00000499125 195 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 HMGB1P41-201ENST00000520234 440 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 FAM60DP-201ENST00000524174 632 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 MIR6130-201ENST00000619419 109 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC006065.5-201ENST00000623427 349 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 AC073073.2-201ENST00000609827 2578 ntBASIC3.95□□□□□ -1.78
ATG4AQ8WYN0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 Y_RNA.72-201ENST00000362894 103 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 Y_RNA.86-201ENST00000363020 111 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 Y_RNA.157-201ENST00000363638 102 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RNU6-996P-201ENST00000365438 107 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 SNORA62-201ENST00000365493 153 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RNU6-641P-201ENST00000384006 107 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RNU2-39P-201ENST00000410604 198 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RNU6-373P-201ENST00000411247 98 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 ATP5JP1-201ENST00000431631 322 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RPL7P28-201ENST00000437739 740 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 MTND1P11-201ENST00000456661 876 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RPS23P7-201ENST00000466210 444 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC006512.1-201ENST00000468816 291 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC126389.1-201ENST00000477436 290 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL163973.1-201ENST00000484753 577 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 LRRC34P2-201ENST00000514850 553 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 MTCO1P35-201ENST00000515270 228 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC026801.2-201ENST00000515352 425 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 SNORD60.2-201ENST00000516883 86 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC010591.1-201ENST00000603941 649 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL591034.3-201ENST00000605511 685 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AL731566.2-201ENST00000618971 317 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 AC074029.4-201ENST00000624796 1859 ntBASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.94□□□□□ -1.78
ATG4AQ8WYN0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 MTND5P3-201ENST00000438536 1800 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RPL7P26-201ENST00000333817 754 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RPL32P3-201ENST00000359025 275 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 MIR135A2-201ENST00000384854 100 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AL136116.1-201ENST00000403591 381 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RNU2-36P-201ENST00000410361 191 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RN7SKP159-201ENST00000410657 292 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 MTATP6P16-201ENST00000434543 526 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms