Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HMGB1P36-201ENST00000487709 576 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC021146.2-201ENST00000504736 556 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC234781.5-201ENST00000508429 271 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC010374.2-201ENST00000512933 535 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 RNU6-970P-201ENST00000516312 107 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 GNAI2P1-201ENST00000541815 315 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 MTCYBP23-201ENST00000558717 1102 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC018618.2-201ENST00000604770 446 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC103810.6-201ENST00000606708 136 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC069294.1-201ENST00000608397 350 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC021851.1-201ENST00000608537 1082 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 MIR6862-1-201ENST00000613016 70 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 MIR6862-2-201ENST00000614755 70 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC006213.4-201ENST00000616184 634 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC098679.5-201ENST00000624394 571 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 AC007785.2-201ENST00000598627 1916 ntBASIC1.05□□□□□ -2.24
SPTSSBQ8NFR3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 MIR218-1-201ENST00000384999 110 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 U6atac.2-201ENST00000408644 118 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 PAICSP7-201ENST00000419829 962 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC005300.1-201ENST00000428401 373 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AL590383.1-201ENST00000428602 75 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 RPL30P4-201ENST00000429309 333 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 Z85994.2-201ENST00000434327 452 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 RPL12P25-201ENST00000455592 494 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 RN7SKP157-201ENST00000516174 282 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC004217.3-201ENST00000551552 878 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 ELOCP29-201ENST00000588193 334 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 SEPT7P9-203ENST00000604116 343 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC079610.2-201ENST00000604818 690 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC080013.4-201ENST00000607624 649 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC093732.2-201ENST00000607950 274 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC024941.1-201ENST00000612250 334 ntBASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.04□□□□□ -2.24
SPTSSBQ8NFR3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNU1-72P-201ENST00000362976 153 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNU1-91P-201ENST00000364746 163 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 U3.13-201ENST00000364804 214 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 SNORA18.3-201ENST00000384122 132 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 CISD1P1-201ENST00000393907 327 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AL360182.1-201ENST00000397433 468 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 SNORA11B-201ENST00000408175 129 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 SNORA11.4-201ENST00000408823 129 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNU2-49P-201ENST00000410666 184 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AL357078.2-201ENST00000416486 427 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AP000936.2-201ENST00000447151 681 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNU1-98P-201ENST00000458992 160 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RPL21P99-201ENST00000480369 423 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC034222.1-201ENST00000494052 532 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNA5SP320-201ENST00000516263 124 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 RNU1-45P-201ENST00000517191 141 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AP002748.2-201ENST00000528671 348 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms