Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RNU6-562P-201ENST00000362731 107 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RNU6-217P-201ENST00000384164 104 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RNU6-1011P-201ENST00000384668 107 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 MIR551A-201ENST00000385042 96 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 MIR1275-201ENST00000408770 80 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RNU2-3P-201ENST00000410144 191 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RN7SKP158-201ENST00000410453 326 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RPL37P10-201ENST00000412884 288 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 SRSF1P1-201ENST00000424058 520 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ATP5LP2-201ENST00000440646 311 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ARL2BPP10-201ENST00000446487 531 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 MTND1P17-201ENST00000448961 204 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ANP32BP2-201ENST00000454525 545 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AL135752.1-201ENST00000479477 471 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC058823.1-201ENST00000485315 474 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC011005.2-201ENST00000487324 359 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC108022.1-201ENST00000493466 478 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 RNU6-1332P-201ENST00000516666 104 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC011853.1-201ENST00000518911 454 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC009902.1-201ENST00000519351 183 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 IFITM8P-201ENST00000522529 394 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AP005639.2-201ENST00000527592 928 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC100830.2-201ENST00000581636 240 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AL645944.1-201ENST00000603857 493 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AL355598.1-201ENST00000604169 202 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC245389.1-201ENST00000605141 529 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AP005432.2-201ENST00000608162 586 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ATP5A1P2-202ENST00000616464 443 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 AC118658.2-201ENST00000618697 459 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 MAPK10-253ENST00000641010 4072 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 ZNF807-201ENST00000328088 1707 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 SNORA51.9-201ENST00000384295 124 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 MIR921-201ENST00000401133 56 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL022722.2-201ENST00000402519 180 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL591034.1-201ENST00000407447 340 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 CYCSP33-201ENST00000414485 327 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 SAR1AP4-201ENST00000429225 591 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL627311.1-201ENST00000431514 115 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 PNKDP1-201ENST00000435914 430 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 BRK1P2-201ENST00000442875 223 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 YRDCP3-201ENST00000456507 480 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.632-201ENST00000459189 102 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 MTND4P17-201ENST00000470444 350 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL122020.1-201ENST00000472287 459 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 RN7SL799P-201ENST00000475891 298 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 MTND5P5-201ENST00000503764 376 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC025755.1-201ENST00000521306 278 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 TOMM20P1-201ENST00000534518 427 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 POLR3GP2-201ENST00000588366 668 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 APOOP1-201ENST00000604695 592 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 FTX_3.1-201ENST00000610451 147 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL442067.2-201ENST00000614033 363 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.93□□□□□ -1.78
CLRN3Q8NCR9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms