Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AP002453.2-201ENST00000533503 320 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC007458.1-201ENST00000542812 373 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL355472.4-201ENST00000610233 626 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC011939.3-201ENST00000613686 466 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AC010678.1-201ENST00000614118 713 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL603839.4-201ENST00000624658 1005 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL049781.1-201ENST00000623195 3585 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
CPSF7Q8N684 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CPSF7Q8N684 AL672296.1-201ENST00000427780 2158 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 RNU4-24P-201ENST00000364565 139 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MIR634-201ENST00000385208 97 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 SNORA40.3-201ENST00000390964 122 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 FCF1P10-201ENST00000407590 479 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 Z92545.1-201ENST00000411782 234 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MTND1P21-201ENST00000412991 285 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 DBIP2-201ENST00000419076 262 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL353777.1-201ENST00000425552 326 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 DUTP6-201ENST00000425573 462 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL049734.2-201ENST00000441066 616 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 MTCO2P7-201ENST00000446518 666 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC108860.1-201ENST00000484521 383 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 CBX3P3-201ENST00000508108 532 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC022447.1-201ENST00000515358 464 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 RNU1-143P-201ENST00000516296 146 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 RN7SKP244-201ENST00000516513 307 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC022616.6-201ENST00000520479 119 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC123904.2-201ENST00000548059 300 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL157394.1-201ENST00000562983 1224 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL356432.3-201ENST00000568952 465 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC005771.1-201ENST00000585581 349 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 SEPT7P9-203ENST00000604116 343 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 U1.23-201ENST00000610293 146 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC008250.2-201ENST00000615261 205 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 RNU1-68P-201ENST00000615382 146 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL450472.3-201ENST00000615578 367 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AC108479.2-201ENST00000617314 601 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MIR6130-201ENST00000619419 109 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL590240.3-201ENST00000621416 943 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 U1.39-201ENST00000621562 146 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL159972.1-201ENST00000625150 448 ntBASIC3.29□□□□□ -1.88
CPSF7Q8N684 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CPSF7Q8N684 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPSF7Q8N684 AL355596.1-201ENST00000565399 3996 ntBASIC3.28□□□□□ -1.88
CPSF7Q8N684 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.28□□□□□ -1.88
CPSF7Q8N684 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms