Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 ELOCP4-201ENST00000420090 333 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC245054.1-201ENST00000420944 258 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC104651.1-201ENST00000427559 735 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RPL31P35-201ENST00000431058 377 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 VDAC1P3-201ENST00000434069 851 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC073063.1-201ENST00000434352 607 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 SNRPGP5-201ENST00000456003 220 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC107401.1-201ENST00000503426 685 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RN7SKP13-201ENST00000515933 244 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RNU6-64P-201ENST00000517119 105 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 OR5D17P-201ENST00000531492 978 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC087883.1-201ENST00000551882 391 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC008121.2-201ENST00000614647 523 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC006338.1-201ENST00000618453 749 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC136475.10-201ENST00000620253 385 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC138649.3-201ENST00000622154 254 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 U6.105-201ENST00000637379 88 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC092326.2-201ENST00000624772 1561 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RNU6-600P-201ENST00000362524 99 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 Y_RNA.41-201ENST00000362646 102 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 SNORA23-201ENST00000365128 182 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 SNORA20.2-201ENST00000383922 131 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RNA5SP107-201ENST00000411358 122 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RPL21P24-201ENST00000413752 448 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL031779.1-201ENST00000415663 330 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 MTCO1P21-201ENST00000416634 589 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 HMGB3P20-201ENST00000417997 600 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL138799.3-201ENST00000438968 350 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC005094.1-201ENST00000440420 368 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 MTCO3P45-201ENST00000443036 613 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC016696.1-201ENST00000446949 318 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 CYCSP35-201ENST00000451978 304 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL049714.1-201ENST00000466686 347 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RPL23AP55-201ENST00000498163 452 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC114797.1-201ENST00000514003 728 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RNU2-58P-201ENST00000516403 183 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RANP9-201ENST00000519957 271 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC100870.1-201ENST00000522035 505 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC008489.1-201ENST00000524271 483 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC006116.10-201ENST00000591836 581 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AL022154.1-201ENST00000604698 785 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC012468.1-201ENST00000604888 430 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 MIR98-201ENST00000606724 119 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 RNVU1-4-201ENST00000612985 164 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC068880.5-201ENST00000624331 290 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC091905.1-201ENST00000624400 311 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 AC099654.12-201ENST00000639868 649 ntBASIC3.35□□□□□ -1.87
BEST3Q8N1M1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
BEST3Q8N1M1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms