Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC244505.5-201ENST00000443639 207 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC112653.1-201ENST00000443851 386 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 ELOCP30-201ENST00000447108 299 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 snoU109.4-201ENST00000458953 143 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC021382.1-201ENST00000483523 359 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 RNU4-60P-201ENST00000517239 135 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC009977.1-201ENST00000586015 570 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 ELOCP29-201ENST00000588193 334 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC055876.5-201ENST00000605667 259 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 uc_338.25-201ENST00000613756 156 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AP001506.1-201ENST00000615444 211 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC006065.5-201ENST00000623427 349 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 AC092447.7-201ENST00000422212 1621 ntBASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRT28Q7Z3Y7 MTND4P5-201ENST00000435821 1374 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-297P-201ENST00000384636 107 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-837P-201ENST00000391056 108 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RNA5SP39-201ENST00000411245 120 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RPS3AP3-201ENST00000411933 242 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AMD1P2-201ENST00000412936 992 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL356968.1-201ENST00000416622 474 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 SPA17P1-201ENST00000416656 452 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL139281.1-201ENST00000422120 335 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC006548.1-201ENST00000427470 102 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC108734.1-201ENST00000439549 399 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL031667.1-201ENST00000440222 725 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL022238.1-201ENST00000442557 355 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 TPT1P7-201ENST00000458300 517 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RN7SL93P-201ENST00000463035 293 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 KLF3P2-201ENST00000465138 268 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RNA5SP367-201ENST00000516557 118 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 SETP2-201ENST00000553886 926 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 RPL21P5-201ENST00000554662 472 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 MIR4644-201ENST00000579929 84 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 NRBF2P5-201ENST00000603087 788 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC073648.5-201ENST00000603502 305 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC138749.5-201ENST00000611461 208 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AL589743.7-201ENST00000612637 233 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC116165.2-201ENST00000616705 206 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC079597.1-201ENST00000624306 508 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 CR381572.1-201ENST00000625098 102 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 AC010149.2-201ENST00000637608 315 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 MTND5P3-201ENST00000438536 1800 ntBASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KRT28Q7Z3Y7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 FRG1BP-201ENST00000278882 761 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 SNORD15B-201ENST00000384714 146 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 U3.20-201ENST00000390909 217 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 RNU2-47P-201ENST00000410649 186 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC016696.1-201ENST00000446949 318 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC108938.1-201ENST00000451204 136 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 HMGN2P7-201ENST00000456186 273 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC107934.2-201ENST00000518653 310 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC009101.1-201ENST00000568135 242 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC060771.1-201ENST00000582031 164 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 DEFB131E-202ENST00000602581 683 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC025165.5-201ENST00000602802 578 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC080078.2-201ENST00000603766 501 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC011451.2-201ENST00000604303 598 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC103858.2-201ENST00000621471 543 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AL359740.1-201ENST00000624340 592 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AL133412.1-201ENST00000380194 2992 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 MTND5P29-201ENST00000458676 1807 ntBASIC4.28□□□□□ -1.72
KRT28Q7Z3Y7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms