Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 MIR5697-201ENST00000578045 78 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC068790.3-201ENST00000602988 553 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC004908.2-201ENST00000609090 574 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 OR10AB1P-201ENST00000609613 938 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC004852.3-201ENST00000614131 326 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC008121.2-201ENST00000614647 523 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 AC027807.2-201ENST00000616099 408 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 U4.6-201ENST00000621618 127 ntBASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUP54Q7Z3B4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 FRG1CP-201ENST00000358464 769 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 RNU5E-5P-201ENST00000365379 116 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 RNU6-533P-201ENST00000384144 107 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MIR19A-201ENST00000384878 82 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AP000907.1-201ENST00000428428 510 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 HMGN2P31-201ENST00000432430 273 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC098826.1-201ENST00000433943 471 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC129850.1-201ENST00000436203 508 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL049734.2-201ENST00000441066 616 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MTND2P4-201ENST00000445034 1004 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MTND2P24-201ENST00000453434 806 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC021205.2-201ENST00000480069 347 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC020893.1-201ENST00000502452 580 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AF131216.2-201ENST00000512316 564 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 SNORA31.21-201ENST00000517180 77 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AP000907.2-201ENST00000530827 353 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL356057.1-201ENST00000533798 831 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC124947.2-202ENST00000552735 133 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 TGIF1P1-201ENST00000558095 802 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MIR4444-1-201ENST00000581696 74 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 MIR4444-2-201ENST00000584390 74 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC012065.4-201ENST00000602445 679 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 Z94722.1-201ENST00000604328 474 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AL355472.4-201ENST00000610233 626 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC004908.3-201ENST00000610248 625 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC019176.2-201ENST00000611579 315 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC104010.1-201ENST00000616889 150 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC112204.3-201ENST00000623822 332 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC090617.7-201ENST00000623952 126 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 AC068880.5-201ENST00000624331 290 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 OR5H6-203ENST00000642105 978 ntBASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.23□□□□□ -1.89
NUP54Q7Z3B4 ELL2P3-201ENST00000457883 1602 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AL136116.1-201ENST00000403591 381 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 CCNG1P1-201ENST00000406783 885 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 MIR1302-8-201ENST00000408342 128 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 SPA17P1-201ENST00000416656 452 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 DBIP2-201ENST00000419076 262 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AC069157.1-201ENST00000421749 137 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AL353777.1-201ENST00000425552 326 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AL158071.1-201ENST00000430315 461 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 SETP8-201ENST00000435341 628 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 RPL22P17-201ENST00000438729 315 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 SNRPFP4-201ENST00000456366 242 ntBASIC3.22□□□□□ -1.89
NUP54Q7Z3B4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms