Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC098614.3-201ENST00000438957 440 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SEPT14P3-201ENST00000439401 183 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL353748.1-201ENST00000440753 474 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL732372.2-207ENST00000445840 183 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SEPT14P2-201ENST00000453405 183 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MTND1P9-201ENST00000453775 944 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RPL21P11-201ENST00000461458 483 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC034236.1-201ENST00000469891 373 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RPL39P36-201ENST00000490784 156 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RN7SL323P-201ENST00000494712 295 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC114786.4-201ENST00000508771 728 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 FTH1P9-201ENST00000513251 355 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SEPT14P4-201ENST00000513445 186 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC114797.1-201ENST00000514003 728 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP401-201ENST00000515920 127 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNU6-410P-201ENST00000517006 107 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP179-201ENST00000517284 121 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 FO082796.1-201ENST00000523795 183 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CENPUP1-201ENST00000526649 1202 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AP000857.1-201ENST00000532151 543 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RAB11AP2-201ENST00000545905 639 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC022968.1-201ENST00000567372 442 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 HMGB1P6-201ENST00000569046 646 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC105224.1-201ENST00000587055 421 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 NRBF2P5-201ENST00000603087 788 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 C8orf59P2-201ENST00000603441 271 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AC012442.3-202ENST00000636742 206 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNU6-511P-201ENST00000363496 107 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNU6-1078P-201ENST00000364522 103 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.279-201ENST00000364763 95 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 SNORA3.3-201ENST00000408712 125 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP44-201ENST00000410446 133 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNU2-62P-201ENST00000410868 191 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNU6-1068P-201ENST00000410958 103 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 OR1AA1P-201ENST00000419597 916 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 OR4K11P-201ENST00000431829 904 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 CALM1P1-201ENST00000442082 433 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC079781.2-201ENST00000446424 169 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL358232.1-201ENST00000448030 501 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 CACYBPP2-201ENST00000453625 678 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC108059.3-201ENST00000456388 214 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AMD1P1-201ENST00000457220 922 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 PMCHL2-203ENST00000457791 237 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RNU6-261P-201ENST00000459506 102 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RPS20P20-201ENST00000460498 340 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL049714.1-201ENST00000466686 347 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC233702.1-201ENST00000482905 502 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RPL31P13-201ENST00000484151 370 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 RPS3AP50-201ENST00000487064 803 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC139783.2-201ENST00000504847 1145 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 OR4R1P-201ENST00000529879 463 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL133153.1-201ENST00000557756 303 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC055876.1-202ENST00000567053 138 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 UBE2V2P2-201ENST00000587677 504 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL117336.2-201ENST00000602435 335 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AP001429.1-201ENST00000602568 530 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC091167.4-201ENST00000605079 184 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL121992.2-201ENST00000606262 256 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC004908.2-201ENST00000609090 574 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC006504.8-201ENST00000621046 635 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 FP236240.3-201ENST00000623061 327 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AL136313.1-201ENST00000624804 202 ntBASIC3.2□□□□□ -1.9
C9orf139Q6ZV77 AC112200.1-201ENST00000625015 234 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms