Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 CCNG1P1-201ENST00000406783 885 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 RPL23AP39-201ENST00000415533 405 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL831737.1-201ENST00000441288 271 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC034236.1-201ENST00000469891 373 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL135752.1-201ENST00000479477 471 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AP000867.2-201ENST00000532468 320 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL133153.1-201ENST00000557756 303 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MIR3944-201ENST00000581277 108 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MIR3609-201ENST00000582661 80 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC013476.2-201ENST00000614456 459 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AL138880.2-201ENST00000616214 239 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC012314.7-201ENST00000619693 93 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC091965.5-201ENST00000624785 342 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AC092192.1-201ENST00000633154 1018 ntBASIC3.12□□□□□ -1.91
CASC4Q6P4E1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
CASC4Q6P4E1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RNU6-223P-201ENST00000362830 107 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AL109755.1-201ENST00000401791 649 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC005005.2-201ENST00000420779 380 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AL590383.1-201ENST00000428602 75 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC006028.1-201ENST00000438379 402 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AL031183.1-201ENST00000457667 207 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RPS20P20-201ENST00000460498 340 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC104472.2-201ENST00000469035 601 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC109925.1-201ENST00000478069 331 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC004263.1-201ENST00000479327 332 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC055855.1-201ENST00000489563 579 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 NRON-201ENST00000517270 370 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 OR5G4P-201ENST00000525251 760 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AF038458.1-201ENST00000588406 262 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC112187.2-201ENST00000604345 283 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 MIR92B-201ENST00000607575 96 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 OR5H6-203ENST00000642105 978 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 TPTE2P4-201ENST00000258589 1605 ntBASIC3.11□□□□□ -1.91
CASC4Q6P4E1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CASC4Q6P4E1 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 RNU6-500P-201ENST00000362349 107 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 MIR34B-201ENST00000385076 84 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 U8.14-201ENST00000390843 143 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 RPL7P25-201ENST00000404151 721 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 TXNP7-201ENST00000406296 293 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL389915.1-201ENST00000422463 466 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL353678.1-201ENST00000422735 741 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL390023.1-201ENST00000428836 262 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.1□□□□□ -1.91
CASC4Q6P4E1 MTCO3P45-201ENST00000443036 613 ntBASIC3.1□□□□□ -1.91
CASC4Q6P4E1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms