Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC023424.2-201ENST00000493479 777 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 RPL30P5-201ENST00000494923 336 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AC021146.8-201ENST00000507455 733 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATL3Q6DD88 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.84□□□□□ -1.95
ATL3Q6DD88 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.84□□□□□ -1.95
ATL3Q6DD88 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AP003467.2-201ENST00000520175 319 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.84□□□□□ -1.95
ATL3Q6DD88 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.84□□□□□ -1.95
ATL3Q6DD88 AC023813.2-201ENST00000564321 469 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AC105224.1-201ENST00000587055 421 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AP001269.3-201ENST00000588718 329 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 RPP40P2-201ENST00000603596 712 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.84□□□□□ -1.95
ATL3Q6DD88 AC004853.1-201ENST00000604902 698 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 ATP1B3P1-201ENST00000605365 821 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AL390208.1-201ENST00000605885 644 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AC006386.1-201ENST00000619436 415 ntBASIC2.84□□□□□ -1.95
ATL3Q6DD88 AL079343.1-201ENST00000572358 1771 ntBASIC2.84□□□□□ -1.96
ATL3Q6DD88 AC005539.1-201ENST00000443768 1479 ntBASIC2.84□□□□□ -1.96
ATL3Q6DD88 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATL3Q6DD88 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATL3Q6DD88 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATL3Q6DD88 NACA3P-201ENST00000359690 648 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 RNU6-925P-201ENST00000384629 104 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 MIR491-201ENST00000384877 84 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 RNU6-1242P-201ENST00000391052 103 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 RNU6-1197P-201ENST00000391183 107 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 MTCO2P8-201ENST00000412213 658 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AL513477.1-202ENST00000417061 214 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC106883.1-201ENST00000418805 562 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AL356867.1-201ENST00000429623 299 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC098826.1-201ENST00000433943 471 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 MTND4P6-201ENST00000438297 472 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AL009048.1-201ENST00000450437 298 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 RNU7-136P-201ENST00000458819 69 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC005410.1-202ENST00000460347 485 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC093677.1-201ENST00000514414 678 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 RNA5SP402-201ENST00000517148 110 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATL3Q6DD88 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 OR4K8P-201ENST00000578842 1048 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 OR4K7P-201ENST00000580232 945 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC067747.1-201ENST00000608026 250 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC106052.1-201ENST00000608029 497 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.83□□□□□ -1.96
ATL3Q6DD88 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
ATL3Q6DD88 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATL3Q6DD88 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATL3Q6DD88 RNU4-92P-201ENST00000363783 136 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 Y_RNA.192-201ENST00000363977 102 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 RNU4-68P-201ENST00000364314 141 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 RNU2-25P-201ENST00000411041 191 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 ATP5F1P1-201ENST00000433775 569 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 SNORD109B-201ENST00000458961 67 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 SNORD109A-201ENST00000459128 67 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AC097493.1-201ENST00000463958 372 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AL049714.1-201ENST00000466686 347 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 RN7SKP132-201ENST00000516001 208 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 SCARNA1-201ENST00000517138 166 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 DEFB131D-201ENST00000526803 184 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 AL645944.1-201ENST00000603857 493 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AC024933.1-201ENST00000608472 348 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 DUXAP10-204ENST00000612052 616 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AL357080.1-201ENST00000617394 239 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 MIR6130-201ENST00000619419 109 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AC109809.1-201ENST00000619665 545 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 AL445264.1-201ENST00000621719 171 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 MIR4275-201ENST00000636486 87 ntBASIC2.82□□□□□ -1.96
ATL3Q6DD88 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATL3Q6DD88 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
ATL3Q6DD88 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
ATL3Q6DD88 ZNF29P-201ENST00000225587 168 ntBASIC2.81□□□□□ -1.96
ATL3Q6DD88 OR5J1P-201ENST00000313544 939 ntBASIC2.81□□□□□ -1.96
ATL3Q6DD88 Y_RNA.311-201ENST00000365068 96 ntBASIC2.81□□□□□ -1.96
ATL3Q6DD88 RNA5SP252-201ENST00000391131 119 ntBASIC2.81□□□□□ -1.96
ATL3Q6DD88 AL139039.1-201ENST00000401900 692 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms