Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AP004371.1-201ENST00000525240 214 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 SUB1P2-201ENST00000556401 297 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AL450472.3-201ENST00000615578 367 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AL357559.1-201ENST00000622228 274 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 AL034408.1-202ENST00000636088 415 ntBASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC44A4Q53GD3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 ZNF962P-201ENST00000443465 3140 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RNA5SP235-201ENST00000365411 114 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RNU6-39P-201ENST00000384344 107 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RNA5SP239-201ENST00000410218 129 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC091390.3-201ENST00000426478 338 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AL136380.1-201ENST00000447970 162 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 ABCF2P2-201ENST00000450549 296 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC108059.3-201ENST00000456388 214 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RPL7P23-201ENST00000493874 747 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC010493.1-201ENST00000513479 292 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC026801.2-201ENST00000515352 425 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 RNU6-64P-201ENST00000517119 105 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC109635.3-201ENST00000529536 185 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 SNRPGP15-201ENST00000600149 222 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC103710.2-201ENST00000609912 942 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AC019278.1-201ENST00000623516 479 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 AL359697.1-201ENST00000624879 587 ntBASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SLC44A4Q53GD3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SLC44A4Q53GD3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
SLC44A4Q53GD3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.15□□□□□ -1.74
SLC44A4Q53GD3 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.159-201ENST00000363674 87 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.160-201ENST00000363677 92 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RNU6-335P-201ENST00000364563 113 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.381-201ENST00000365666 102 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 SNORD3H-201ENST00000384486 214 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RNU6-456P-201ENST00000384493 107 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 Y_RNA.573-201ENST00000384763 105 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC068050.1-201ENST00000394891 380 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RHEBP3-201ENST00000411920 351 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RPS7P15-201ENST00000415804 584 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 UBE2FP1-201ENST00000416536 447 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 HMGN2P21-201ENST00000447764 270 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RPS11P1-201ENST00000451072 473 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 RPS15AP36-201ENST00000492022 382 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 HMGN1P12-201ENST00000499125 195 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 MTCYBP18-201ENST00000501056 747 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 SNORA31.20-201ENST00000517111 133 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC103783.1-201ENST00000520506 373 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC123904.3-201ENST00000547218 814 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AL512360.1-201ENST00000555346 234 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC025627.2-201ENST00000576220 160 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 MIR5684-201ENST00000585074 65 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 UBE2V2P2-201ENST00000587677 504 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AL034351.1-201ENST00000605288 668 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AL121757.2-201ENST00000611223 313 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 AC243312.2-201ENST00000623340 601 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 MIR1321-201ENST00000637766 79 ntBASIC4.15□□□□□ -1.75
SLC44A4Q53GD3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms