Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 Y_RNA.251-201ENST00000364551 99 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 RNU6-203P-201ENST00000384038 104 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 Y_RNA.458-201ENST00000384240 102 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGXB3Q12766 AL078601.1-201ENST00000444542 271 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGXB3Q12766 SNRPFP3-201ENST00000457792 225 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 RNA5SP364-201ENST00000516938 78 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGXB3Q12766 SNORA31-201ENST00000362607 130 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGXB3Q12766 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.22□□□□□ -2.05
HMGXB3Q12766 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HMGXB3Q12766 AC019176.1-201ENST00000518519 225 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 AC025755.1-201ENST00000521306 278 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 AL356118.1-201ENST00000635272 1078 ntBASIC2.22□□□□□ -2.05
HMGXB3Q12766 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGXB3Q12766 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HMGXB3Q12766 Y_RNA.433-201ENST00000384089 102 ntBASIC2.21□□□□□ -2.06
HMGXB3Q12766 ANAPC10P1-201ENST00000395991 556 ntBASIC2.21□□□□□ -2.06
HMGXB3Q12766 RNA5SP38-201ENST00000410750 119 ntBASIC2.21□□□□□ -2.06
HMGXB3Q12766 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGXB3Q12766 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.21□□□□□ -2.06
HMGXB3Q12766 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.21□□□□□ -2.06
HMGXB3Q12766 HAUS1P1-201ENST00000505275 832 ntBASIC2.21□□□□□ -2.06
HMGXB3Q12766 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.21□□□□□ -2.06
HMGXB3Q12766 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HMGXB3Q12766 RNA5SP363-201ENST00000365072 115 ntBASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC090096.1-201ENST00000489168 390 ntBASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC113155.1-201ENST00000511141 769 ntBASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HMGXB3Q12766 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.2□□□□□ -2.06
HMGXB3Q12766 DNAJC19P6-201ENST00000401853 280 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC007098.1-201ENST00000420122 367 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC244033.1-201ENST00000426826 870 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 RNU6-347P-201ENST00000516658 105 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 RNU6-943P-201ENST00000516960 98 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.19□□□□□ -2.06
HMGXB3Q12766 MTND2P17-201ENST00000550281 688 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.19□□□□□ -2.06
HMGXB3Q12766 MTCO3P24-201ENST00000572729 782 ntBASIC2.19□□□□□ -2.06
HMGXB3Q12766 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.19□□□□□ -2.06
HMGXB3Q12766 PABPC1P9-201ENST00000426076 1612 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNU1-133P-201ENST00000364867 167 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNA5SP189-201ENST00000364920 115 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNU1-139P-201ENST00000391307 165 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGXB3Q12766 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGXB3Q12766 PSMA2P3-201ENST00000429685 675 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RPL35AP22-201ENST00000436855 335 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 HMGN2P20-201ENST00000437531 273 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGXB3Q12766 SNORD121B-201ENST00000458838 81 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNU6-1218P-201ENST00000458990 108 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 AC090515.1-201ENST00000465295 476 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNA5SP337-201ENST00000517007 109 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGXB3Q12766 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
HMGXB3Q12766 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGXB3Q12766 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 RNU6-882P-201ENST00000391025 103 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGXB3Q12766 AC090740.1-201ENST00000623193 2262 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 RNA5SP105-201ENST00000391123 113 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AL589994.1-201ENST00000404962 340 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AC109780.2-201ENST00000413467 845 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 RPL30P3-201ENST00000424262 333 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 HAR1A.1-201ENST00000459583 118 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 MIR5000-201ENST00000577717 103 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AP001180.3-201ENST00000582221 145 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AL031274.2-201ENST00000599419 203 ntBASIC2.17□□□□□ -2.06
HMGXB3Q12766 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGXB3Q12766 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 RPL31P52-201ENST00000407532 367 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 BX682237.1-201ENST00000415016 335 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGXB3Q12766 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGXB3Q12766 AC005534.2-201ENST00000431047 433 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGXB3Q12766 RN7SKP265-201ENST00000516448 223 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 MIR4474-201ENST00000579189 78 ntBASIC2.16□□□□□ -2.06
HMGXB3Q12766 7SK.7-201ENST00000603504 247 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms