Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.84□□□□□ -2.28
HSPG2P98160 MKKS-204ENST00000639674 192 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 AC090740.1-201ENST00000623193 2262 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 RNA5SP363-201ENST00000365072 115 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.84□□□□□ -2.28
HSPG2P98160 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.84□□□□□ -2.28
HSPG2P98160 uc_338.20-201ENST00000621563 178 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 AC111188.2-201ENST00000529697 1387 ntBASIC0.84□□□□□ -2.28
HSPG2P98160 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HSPG2P98160 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HSPG2P98160 MIR758-201ENST00000390227 88 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 RNU1-78P-201ENST00000391248 165 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 RPL26P37-201ENST00000411983 438 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.83□□□□□ -2.28
HSPG2P98160 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
HSPG2P98160 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.83□□□□□ -2.28
HSPG2P98160 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HSPG2P98160 AC079776.3-201ENST00000450665 370 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.83□□□□□ -2.28
HSPG2P98160 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HSPG2P98160 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.83□□□□□ -2.28
HSPG2P98160 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
HSPG2P98160 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
HSPG2P98160 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.83□□□□□ -2.28
HSPG2P98160 RPL23AP41-201ENST00000484754 458 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 PRELID2P1-201ENST00000552837 301 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 TRAV28-201ENST00000557548 323 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.83□□□□□ -2.28
HSPG2P98160 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
HSPG2P98160 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HSPG2P98160 AC109780.2-201ENST00000413467 845 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.82□□□□□ -2.28
HSPG2P98160 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.82□□□□□ -2.28
HSPG2P98160 AL445305.1-201ENST00000432577 575 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.82□□□□□ -2.28
HSPG2P98160 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.82□□□□□ -2.28
HSPG2P98160 MIR4512-201ENST00000583257 77 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC010928.2-201ENST00000588017 287 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC096772.1-201ENST00000609146 564 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC116447.1-201ENST00000613153 453 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HSPG2P98160 RNA5SP489-201ENST00000410986 109 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC007115.1-201ENST00000546853 234 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AL133393.1-201ENST00000603277 287 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC000123.2-201ENST00000623124 461 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC012640.5-201ENST00000623897 319 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 MIR4278-201ENST00000636094 69 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 RPL19P1-201ENST00000411635 428 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.82□□□□□ -2.28
HSPG2P98160 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.82□□□□□ -2.28
HSPG2P98160 AC096720.1-201ENST00000604441 183 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.82□□□□□ -2.28
HSPG2P98160 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HSPG2P98160 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HSPG2P98160 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.82□□□□□ -2.28
HSPG2P98160 U3.40-201ENST00000408706 208 ntBASIC0.82□□□□□ -2.28
HSPG2P98160 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.82□□□□□ -2.28
HSPG2P98160 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.82□□□□□ -2.28
HSPG2P98160 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.82□□□□□ -2.28
HSPG2P98160 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.81□□□□□ -2.28
HSPG2P98160 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.81□□□□□ -2.28
HSPG2P98160 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.81□□□□□ -2.28
HSPG2P98160 DUXAP9-208ENST00000622815 614 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 AC135776.4-201ENST00000624300 1904 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.81□□□□□ -2.28
HSPG2P98160 MTND4P1-201ENST00000457501 1466 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 Y_RNA.274-201ENST00000364714 101 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
HSPG2P98160 EBAG9P1-201ENST00000418955 543 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 RPL30P3-201ENST00000424262 333 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.81□□□□□ -2.28
HSPG2P98160 MTCO1P30-201ENST00000515244 580 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.81□□□□□ -2.28
HSPG2P98160 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.81□□□□□ -2.28
HSPG2P98160 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.81□□□□□ -2.28
HSPG2P98160 OR4K8P-201ENST00000578842 1048 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 MIR3618-201ENST00000580330 88 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HSPG2P98160 SNHG22-203ENST00000617833 660 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 AC090617.7-201ENST00000623952 126 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HSPG2P98160 AL359851.1-201ENST00000569460 4997 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 Y_RNA.294-201ENST00000364916 102 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 HMGN1P14-201ENST00000412459 517 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 RPS15AP7-201ENST00000439294 405 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 RPS26P56-201ENST00000444468 240 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.81□□□□□ -2.28
HSPG2P98160 AC007229.1-201ENST00000590455 412 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 AC006329.2-201ENST00000611491 394 ntBASIC0.81□□□□□ -2.28
HSPG2P98160 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.81□□□□□ -2.28
HSPG2P98160 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.8□□□□□ -2.28
HSPG2P98160 NEFMP1-201ENST00000443423 1006 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 ACTR3BP3-201ENST00000565577 979 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 U73023.1-201ENST00000603134 700 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 SEPT7P9-203ENST00000604116 343 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 MIR2909-201ENST00000617113 69 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 Z85995.1-201ENST00000415547 335 ntBASIC0.8□□□□□ -2.28
HSPG2P98160 AC018630.2-202ENST00000422992 927 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms