Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 SNORD108-201ENST00000459332 71 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.99□□□□□ -2.25
PRKDCP78527 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC005498.1-201ENST00000592125 465 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 AC012640.5-201ENST00000623897 319 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC009541.1-201ENST00000438279 2662 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 XKRYP6-201ENST00000440468 1116 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 XKRYP3-201ENST00000442113 1116 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 SNRPFP3-201ENST00000457792 225 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC090453.1-201ENST00000495560 436 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.99□□□□□ -2.25
PRKDCP78527 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.99□□□□□ -2.25
PRKDCP78527 AL133393.1-201ENST00000603277 287 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 FO624990.1-201ENST00000636373 85 ntBASIC0.99□□□□□ -2.25
PRKDCP78527 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.99□□□□□ -2.25
PRKDCP78527 Y_RNA.274-201ENST00000364714 101 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 EBAG9P1-201ENST00000418955 543 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 MTCYBP45-201ENST00000435243 565 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.98□□□□□ -2.25
PRKDCP78527 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC089999.1-201ENST00000460336 374 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PRKDCP78527 AC011468.4-201ENST00000603942 409 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC006329.2-201ENST00000611491 394 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AC011890.2-201ENST00000613393 294 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AC121333.1-201ENST00000567488 2709 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PRKDCP78527 MIRLET7G-201ENST00000362280 84 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AIMP1P2-201ENST00000425294 312 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 NEFMP1-201ENST00000443423 1006 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.98□□□□□ -2.25
PRKDCP78527 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.98□□□□□ -2.25
PRKDCP78527 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PRKDCP78527 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC007229.1-201ENST00000590455 412 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 SNORD56.5-201ENST00000364281 72 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 MCTS2P-201ENST00000394552 546 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.98□□□□□ -2.25
PRKDCP78527 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.98□□□□□ -2.25
PRKDCP78527 AC023790.1-201ENST00000482174 347 ntBASIC0.98□□□□□ -2.25
PRKDCP78527 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.98□□□□□ -2.25
PRKDCP78527 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.97□□□□□ -2.25
PRKDCP78527 ARL5AP3-201ENST00000439327 386 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 SNRPFP2-201ENST00000440710 251 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.97□□□□□ -2.25
PRKDCP78527 RNU7-157P-201ENST00000459600 66 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.97□□□□□ -2.25
PRKDCP78527 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.97□□□□□ -2.25
PRKDCP78527 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
PRKDCP78527 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.97□□□□□ -2.25
PRKDCP78527 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.97□□□□□ -2.25
PRKDCP78527 AL020996.3-201ENST00000606617 222 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 AC096772.1-201ENST00000609146 564 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.97□□□□□ -2.25
PRKDCP78527 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.97□□□□□ -2.25
PRKDCP78527 OR51B8P-201ENST00000449892 769 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.97□□□□□ -2.25
PRKDCP78527 DUXAP5-201ENST00000529668 529 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 SNRPGP15-201ENST00000600149 222 ntBASIC0.97□□□□□ -2.25
PRKDCP78527 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
PRKDCP78527 AC104115.2-201ENST00000523026 687 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 U73023.1-201ENST00000603134 700 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PRKDCP78527 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.96□□□□□ -2.26
PRKDCP78527 AC135776.4-201ENST00000624300 1904 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
PRKDCP78527 Y_RNA.294-201ENST00000364916 102 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RNA5SP189-201ENST00000364920 115 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 MIR758-201ENST00000390227 88 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RPL19P1-201ENST00000411635 428 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 HMGN1P14-201ENST00000412459 517 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RPL31P35-201ENST00000431058 377 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC0.96□□□□□ -2.26
PRKDCP78527 MIR514B-201ENST00000516774 80 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 MIR3618-201ENST00000580330 88 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 AL121917.1-203ENST00000605534 577 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 AL135786.2-201ENST00000608422 615 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 MTND5P10-201ENST00000603719 1809 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 UBE2V2P1-201ENST00000434717 398 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.96□□□□□ -2.26
PRKDCP78527 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.96□□□□□ -2.26
PRKDCP78527 BTF3P12-201ENST00000519620 469 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 MTND2P13-201ENST00000577438 1039 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RNA5SP108-201ENST00000605921 117 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 uc_338.20-201ENST00000621563 178 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
PRKDCP78527 HSPE1P11-201ENST00000339579 310 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RNU6-50P-201ENST00000362356 103 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms