Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PPP1R2P5-201ENST00000457256 603 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA4P78363 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.48□□□□□ -2.17
ABCA4P78363 CDC42P4-201ENST00000510507 563 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 AC092470.1-201ENST00000546187 132 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA4P78363 PRELID2P1-201ENST00000552837 301 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 AL161670.1-201ENST00000554348 137 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA4P78363 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.48□□□□□ -2.17
ABCA4P78363 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.48□□□□□ -2.17
ABCA4P78363 U73023.1-201ENST00000603134 700 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 AL359740.1-201ENST00000624340 592 ntBASIC1.48□□□□□ -2.17
ABCA4P78363 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ABCA4P78363 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA4P78363 RNY1-201ENST00000364228 113 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 RNU6-1197P-201ENST00000391183 107 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 FO393413.1-201ENST00000402892 195 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 TPTE2P6-202ENST00000445572 1007 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC234775.1-201ENST00000454247 670 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA4P78363 SETP11-201ENST00000473027 690 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA4P78363 MRPL42P6-201ENST00000486397 371 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC023424.2-201ENST00000493479 777 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA4P78363 AC117525.1-201ENST00000515228 503 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 RNA5SP102-201ENST00000516865 106 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.47□□□□□ -2.17
ABCA4P78363 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AL590410.1-201ENST00000617925 333 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA4P78363 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA4P78363 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.47□□□□□ -2.17
ABCA4P78363 WARS2P1-201ENST00000429678 537 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 HMGB1P31-201ENST00000437242 427 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 MTCYBP34-201ENST00000439552 670 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 snoU13.4-201ENST00000458916 104 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 TOMM22P6-201ENST00000465035 409 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.47□□□□□ -2.17
ABCA4P78363 ATP5EP1-201ENST00000510257 156 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 MTCO1P47-201ENST00000523889 1271 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 PSMA3P-201ENST00000555485 635 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC008687.2-201ENST00000597865 520 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC024560.3-201ENST00000608482 349 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC093838.1-201ENST00000613014 469 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 AC087359.1-201ENST00000508335 1740 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 MTCO1P6-201ENST00000481192 1384 ntBASIC1.47□□□□□ -2.17
ABCA4P78363 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ABCA4P78363 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
ABCA4P78363 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
ABCA4P78363 RNU1-105P-201ENST00000363470 161 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 Y_RNA.295-201ENST00000364918 102 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC096632.1-201ENST00000427395 310 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 ATP5J2P3-201ENST00000451550 258 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.46□□□□□ -2.18
ABCA4P78363 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA4P78363 ERHP1-201ENST00000523006 310 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 MTND2P26-201ENST00000528255 1029 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 OR4P1P-201ENST00000530808 1136 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA4P78363 SETP2-201ENST00000553886 926 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA4P78363 ACTR3BP3-201ENST00000565577 979 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 OR4G1P-201ENST00000588632 938 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ABCA4P78363 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
ABCA4P78363 Y_RNA.112-201ENST00000363250 102 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 RNU6-263P-201ENST00000363811 107 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 Y_RNA.354-201ENST00000365448 111 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA4P78363 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA4P78363 MTCYBP17-201ENST00000503579 789 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC008526.1-201ENST00000509149 338 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA4P78363 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.46□□□□□ -2.18
ABCA4P78363 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.46□□□□□ -2.18
ABCA4P78363 AC087272.1-201ENST00000523624 533 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC135178.6-201ENST00000605314 398 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AL161734.1-201ENST00000609720 557 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 uc_338.5-201ENST00000611839 155 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC068880.5-201ENST00000624331 290 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 BX649567.1-201ENST00000642071 1134 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 AC009487.4-201ENST00000624969 3585 ntBASIC1.46□□□□□ -2.18
ABCA4P78363 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ABCA4P78363 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ABCA4P78363 SGO1P2-201ENST00000429458 1589 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
ABCA4P78363 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ABCA4P78363 RNU6-821P-201ENST00000390995 107 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 HMGB3P31-201ENST00000413333 595 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL021397.1-201ENST00000451806 248 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC008494.2-201ENST00000514544 370 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms