Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.52□□□□□ -2.17
LSM3P62310 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LSM3P62310 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.52□□□□□ -2.17
LSM3P62310 PSPHP1-201ENST00000450062 261 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC079203.1-201ENST00000487972 404 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC103783.1-201ENST00000520506 373 ntBASIC1.52□□□□□ -2.17
LSM3P62310 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LSM3P62310 HMGB1P14-201ENST00000557424 591 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.52□□□□□ -2.17
LSM3P62310 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.52□□□□□ -2.17
LSM3P62310 UBE2L4-201ENST00000587688 464 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC005498.1-201ENST00000592125 465 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AL137246.1-201ENST00000607072 977 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC016542.1-201ENST00000608259 493 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AP001486.3-201ENST00000615334 372 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC004777.1-201ENST00000624317 287 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AC092608.3-201ENST00000625017 386 ntBASIC1.52□□□□□ -2.17
LSM3P62310 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.52□□□□□ -2.17
LSM3P62310 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LSM3P62310 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.51□□□□□ -2.17
LSM3P62310 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LSM3P62310 RNU6-525P-201ENST00000363685 104 ntBASIC1.51□□□□□ -2.17
LSM3P62310 SNORA80A-201ENST00000363922 136 ntBASIC1.51□□□□□ -2.17
LSM3P62310 RNU6-1035P-201ENST00000384477 107 ntBASIC1.51□□□□□ -2.17
LSM3P62310 RNU6-882P-201ENST00000391025 103 ntBASIC1.51□□□□□ -2.17
LSM3P62310 RNA5SP171-201ENST00000391071 115 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC092745.2-202ENST00000411880 369 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 AC236972.1-201ENST00000433225 199 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.51□□□□□ -2.17
LSM3P62310 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 AC055731.1-201ENST00000474387 401 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC096576.1-201ENST00000489014 359 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 HMGB3P17-201ENST00000504195 649 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 BTF3P12-201ENST00000519620 469 ntBASIC1.51□□□□□ -2.17
LSM3P62310 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 MTCYBP27-201ENST00000555160 670 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM3P62310 AC013444.2-201ENST00000603317 787 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC002487.1-201ENST00000604565 994 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC242628.1-201ENST00000606810 391 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC135507.1-201ENST00000607214 561 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 AC097504.2-201ENST00000608088 454 ntBASIC1.51□□□□□ -2.17
LSM3P62310 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM3P62310 AC006213.4-201ENST00000616184 634 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AC090772.4-201ENST00000623599 362 ntBASIC1.51□□□□□ -2.17
LSM3P62310 AP003485.2-201ENST00000623636 610 ntBASIC1.51□□□□□ -2.17
LSM3P62310 MIR219B-201ENST00000637023 88 ntBASIC1.51□□□□□ -2.17
LSM3P62310 ZNF90P1-201ENST00000480493 1951 ntBASIC1.5□□□□□ -2.17
LSM3P62310 MTCO1P4-201ENST00000520516 1409 ntBASIC1.5□□□□□ -2.17
LSM3P62310 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LSM3P62310 RNU6-1155P-201ENST00000363554 107 ntBASIC1.5□□□□□ -2.17
LSM3P62310 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LSM3P62310 SEPT2P1-201ENST00000419651 180 ntBASIC1.5□□□□□ -2.17
LSM3P62310 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.5□□□□□ -2.17
LSM3P62310 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.5□□□□□ -2.17
LSM3P62310 MORF4L1P4-201ENST00000450245 976 ntBASIC1.5□□□□□ -2.17
LSM3P62310 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 AC104164.3-201ENST00000467363 1258 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.5□□□□□ -2.17
LSM3P62310 AC022880.1-201ENST00000534017 973 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.5□□□□□ -2.17
LSM3P62310 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM3P62310 LARP7P3-201ENST00000579888 337 ntBASIC1.5□□□□□ -2.17
LSM3P62310 MIR3616-201ENST00000584070 92 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.5□□□□□ -2.17
LSM3P62310 AC025588.2-201ENST00000604851 466 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AC107214.2-201ENST00000608204 634 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AC135507.2-201ENST00000612443 309 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AL161423.1-201ENST00000613700 262 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AC009318.4-201ENST00000620496 486 ntBASIC1.5□□□□□ -2.17
LSM3P62310 AP003399.1-201ENST00000637534 361 ntBASIC1.5□□□□□ -2.17
LSM3P62310 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LSM3P62310 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
LSM3P62310 SNORA5B-201ENST00000363786 132 ntBASIC1.49□□□□□ -2.17
LSM3P62310 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
LSM3P62310 AL035405.1-201ENST00000400795 710 ntBASIC1.49□□□□□ -2.17
LSM3P62310 ATP5F1P6-201ENST00000402768 767 ntBASIC1.49□□□□□ -2.17
LSM3P62310 RPS7P9-201ENST00000414704 586 ntBASIC1.49□□□□□ -2.17
LSM3P62310 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.49□□□□□ -2.17
LSM3P62310 AC024082.2-201ENST00000434771 238 ntBASIC1.49□□□□□ -2.17
LSM3P62310 CYCSP32-201ENST00000440548 321 ntBASIC1.49□□□□□ -2.17
LSM3P62310 AL360221.1-201ENST00000445989 335 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms