Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AF235103.2-201ENST00000525753 346 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A1P61619 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.4□□□□□ -1.87
SEC61A1P61619 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.4□□□□□ -1.87
SEC61A1P61619 AC025627.2-201ENST00000576220 160 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A1P61619 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 MIR5684-201ENST00000585074 65 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.4□□□□□ -1.87
SEC61A1P61619 KC877982.1-201ENST00000602313 470 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 OR6R2P-201ENST00000609216 300 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 AC245517.5-201ENST00000611529 162 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
SEC61A1P61619 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A1P61619 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.4□□□□□ -1.87
SEC61A1P61619 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A1P61619 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A1P61619 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SEC61A1P61619 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.4□□□□□ -1.87
SEC61A1P61619 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 CBX3P1-201ENST00000325243 554 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SEC61A1P61619 SNORA60-201ENST00000362396 134 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 RNU6-451P-201ENST00000362921 107 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 Y_RNA.86-201ENST00000363020 111 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 SNORA69-201ENST00000383895 132 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SEC61A1P61619 RN7SKP177-201ENST00000410567 355 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 RNU6-1068P-201ENST00000410958 103 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 OR9R1P-201ENST00000412200 877 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AL159169.1-201ENST00000421119 127 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC002075.2-201ENST00000425207 252 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AL691449.1-201ENST00000426570 421 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC098614.3-201ENST00000438957 440 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 RPS29P7-201ENST00000439662 171 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 SNORD121B-201ENST00000458838 81 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 RPL7L1P8-201ENST00000469911 741 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AC233702.1-201ENST00000482905 502 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 VN1R105P-201ENST00000486595 910 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 HMGN1P12-201ENST00000499125 195 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AC020593.1-201ENST00000507399 299 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 RNU6-835P-201ENST00000516974 104 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 RAB11AP2-201ENST00000545905 639 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 CR383656.7-201ENST00000548164 174 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.39□□□□□ -1.87
SEC61A1P61619 OR4T1P-201ENST00000554933 911 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC007038.2-201ENST00000608095 740 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 AL136313.1-201ENST00000624804 202 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
SEC61A1P61619 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEC61A1P61619 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.38□□□□□ -1.87
SEC61A1P61619 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.38□□□□□ -1.87
SEC61A1P61619 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SEC61A1P61619 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.38□□□□□ -1.87
SEC61A1P61619 RNU6-223P-201ENST00000362830 107 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 RNU6-1120P-201ENST00000362988 108 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 RNY3P3-201ENST00000363816 102 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 RNU5A-8P-201ENST00000364102 114 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 RNU1-64P-201ENST00000365443 163 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.38□□□□□ -1.87
SEC61A1P61619 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
SEC61A1P61619 MIR134-201ENST00000385258 73 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 RNU6-837P-201ENST00000391056 108 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 HSPE1P8-201ENST00000406997 288 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.38□□□□□ -1.87
SEC61A1P61619 RPL21P109-201ENST00000422213 475 ntBASIC3.38□□□□□ -1.87
SEC61A1P61619 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.38□□□□□ -1.87
SEC61A1P61619 FTH1P6-201ENST00000430768 320 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms