Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
RHBDL3P58872 SNORA26.8-201ENST00000391306 124 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 BX323014.1-201ENST00000412876 237 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 USP9YP13-201ENST00000417797 480 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 AC137499.1-201ENST00000427602 88 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 AC244035.1-201ENST00000430042 390 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDL3P58872 RPL23AP69-201ENST00000431134 458 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 ISCA1P2-201ENST00000438679 421 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 SNORD97-201ENST00000459187 142 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 RPL21P8-201ENST00000465083 535 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 RN7SL594P-201ENST00000470590 287 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 RPL21P13-201ENST00000488305 481 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.16□□□□□ -1.74
RHBDL3P58872 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDL3P58872 TTC39CP1-201ENST00000512513 755 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.16□□□□□ -1.74
RHBDL3P58872 AP006245.1-201ENST00000522549 120 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 HIGD1AP1-201ENST00000550979 275 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDL3P58872 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDL3P58872 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDL3P58872 CLIC4P2-201ENST00000601934 717 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 AC068276.1-201ENST00000605793 379 ntBASIC4.16□□□□□ -1.74
RHBDL3P58872 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.16□□□□□ -1.74
RHBDL3P58872 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.16□□□□□ -1.74
RHBDL3P58872 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDL3P58872 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RHBDL3P58872 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
RHBDL3P58872 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.15□□□□□ -1.74
RHBDL3P58872 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
RHBDL3P58872 ZNF826P-207ENST00000622273 1910 ntBASIC4.15□□□□□ -1.74
RHBDL3P58872 AL079305.1-201ENST00000623159 3008 ntBASIC4.15□□□□□ -1.74
RHBDL3P58872 RNY3P13-201ENST00000365542 102 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RHBDL3P58872 RNU1-101P-201ENST00000391171 127 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 Z85995.1-201ENST00000415547 335 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AL356583.2-201ENST00000426536 280 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDL3P58872 SSXP1-201ENST00000453640 473 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDL3P58872 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.15□□□□□ -1.75
RHBDL3P58872 PCBP2P3-201ENST00000509726 843 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 RNU6-927P-201ENST00000516199 100 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.15□□□□□ -1.75
RHBDL3P58872 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.15□□□□□ -1.75
RHBDL3P58872 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.15□□□□□ -1.75
RHBDL3P58872 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDL3P58872 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.15□□□□□ -1.75
RHBDL3P58872 HSPE1P7-201ENST00000604681 321 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AC239868.4-201ENST00000608318 671 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AC004696.1-201ENST00000614345 607 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 AL136313.1-201ENST00000624804 202 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.15□□□□□ -1.75
RHBDL3P58872 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RHBDL3P58872 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RHBDL3P58872 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
RHBDL3P58872 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
RHBDL3P58872 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDL3P58872 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RHBDL3P58872 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RHBDL3P58872 RNU6-1035P-201ENST00000384477 107 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHBDL3P58872 RNU2-33P-201ENST00000410344 192 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDL3P58872 CYCSP46-201ENST00000423569 204 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC019097.1-201ENST00000424783 735 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 TRIM60P18-201ENST00000441518 828 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDL3P58872 AC023598.1-201ENST00000472521 361 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL160314.1-201ENST00000490836 438 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.14□□□□□ -1.75
RHBDL3P58872 RN7SKP258-201ENST00000517151 304 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 RN7SKP57-201ENST00000517248 293 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL157394.1-201ENST00000562983 1224 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC037471.2-201ENST00000564941 598 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AMZ2P1-203ENST00000565833 850 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 MIR4293-201ENST00000584305 78 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 BNIP3P8-201ENST00000597863 560 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.6-201ENST00000603753 252 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.11-201ENST00000604059 253 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC008162.1-201ENST00000604718 254 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.1-201ENST00000604752 252 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.5-201ENST00000605253 252 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.12-201ENST00000605291 253 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.8-201ENST00000605353 252 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AL670379.7-201ENST00000605823 252 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 MIR7112-201ENST00000616126 65 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AP003122.6-201ENST00000623831 495 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 AC068057.2-201ENST00000624047 895 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.14□□□□□ -1.75
RHBDL3P58872 MFSD8-233ENST00000641482 4860 ntBASIC4.14□□□□□ -1.75
RHBDL3P58872 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RHBDL3P58872 AC073073.2-201ENST00000609827 2578 ntBASIC4.13□□□□□ -1.75
RHBDL3P58872 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDL3P58872 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDL3P58872 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms