Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.11□□□□□ -1.91
VCPP55072 RNU4-29P-201ENST00000515943 174 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC022861.1-201ENST00000522981 663 ntBASIC3.11□□□□□ -1.91
VCPP55072 DEFB131D-201ENST00000526803 184 ntBASIC3.11□□□□□ -1.91
VCPP55072 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.11□□□□□ -1.91
VCPP55072 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.11□□□□□ -1.91
VCPP55072 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.11□□□□□ -1.91
VCPP55072 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.11□□□□□ -1.91
VCPP55072 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.11□□□□□ -1.91
VCPP55072 NUTF2P8-201ENST00000604593 363 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC006270.3-201ENST00000605967 1036 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC107952.2-201ENST00000606048 486 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC034229.4-201ENST00000607861 441 ntBASIC3.11□□□□□ -1.91
VCPP55072 AC245297.2-201ENST00000610119 565 ntBASIC3.11□□□□□ -1.91
VCPP55072 AP000484.1-201ENST00000620067 1252 ntBASIC3.11□□□□□ -1.91
VCPP55072 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 AC097714.1-201ENST00000511272 1647 ntBASIC3.11□□□□□ -1.91
VCPP55072 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VCPP55072 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VCPP55072 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
VCPP55072 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
VCPP55072 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VCPP55072 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPP55072 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VCPP55072 RNU4-28P-201ENST00000364739 141 ntBASIC3.1□□□□□ -1.91
VCPP55072 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
VCPP55072 AL136372.1-201ENST00000403060 228 ntBASIC3.1□□□□□ -1.91
VCPP55072 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPP55072 RPL22P18-201ENST00000417197 377 ntBASIC3.1□□□□□ -1.91
VCPP55072 AL645937.1-202ENST00000421799 937 ntBASIC3.1□□□□□ -1.91
VCPP55072 AC007742.1-201ENST00000425789 329 ntBASIC3.1□□□□□ -1.91
VCPP55072 SAR1AP4-201ENST00000429225 591 ntBASIC3.1□□□□□ -1.91
VCPP55072 EZH2P1-201ENST00000431167 291 ntBASIC3.1□□□□□ -1.91
VCPP55072 ELOCP26-201ENST00000436067 329 ntBASIC3.1□□□□□ -1.91
VCPP55072 MTCO3P11-201ENST00000455103 774 ntBASIC3.1□□□□□ -1.91
VCPP55072 RPS29P12-201ENST00000460178 152 ntBASIC3.1□□□□□ -1.91
VCPP55072 COX7A2P2-201ENST00000505291 250 ntBASIC3.1□□□□□ -1.91
VCPP55072 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.1□□□□□ -1.91
VCPP55072 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPP55072 AL512310.1-201ENST00000548639 172 ntBASIC3.1□□□□□ -1.91
VCPP55072 AC079600.2-201ENST00000550076 130 ntBASIC3.1□□□□□ -1.91
VCPP55072 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPP55072 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.1□□□□□ -1.91
VCPP55072 AC078899.3-201ENST00000599065 212 ntBASIC3.1□□□□□ -1.91
VCPP55072 AL022099.1-201ENST00000604551 712 ntBASIC3.1□□□□□ -1.91
VCPP55072 AL158042.1-201ENST00000605338 460 ntBASIC3.1□□□□□ -1.91
VCPP55072 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.1□□□□□ -1.91
VCPP55072 AC131902.3-201ENST00000611767 581 ntBASIC3.1□□□□□ -1.91
VCPP55072 AL138880.2-201ENST00000616214 239 ntBASIC3.1□□□□□ -1.91
VCPP55072 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
VCPP55072 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
VCPP55072 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.1□□□□□ -1.91
VCPP55072 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
VCPP55072 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
VCPP55072 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VCPP55072 FAM133CP-201ENST00000332869 704 ntBASIC3.09□□□□□ -1.91
VCPP55072 U8.9-201ENST00000365667 134 ntBASIC3.09□□□□□ -1.91
VCPP55072 RPL7P8-201ENST00000411964 730 ntBASIC3.09□□□□□ -1.91
VCPP55072 TPMTP2-201ENST00000414372 726 ntBASIC3.09□□□□□ -1.91
VCPP55072 MTATP6P27-201ENST00000416987 621 ntBASIC3.09□□□□□ -1.91
VCPP55072 RPL7P10-201ENST00000417407 739 ntBASIC3.09□□□□□ -1.91
VCPP55072 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPP55072 TOMM20P4-201ENST00000427861 435 ntBASIC3.09□□□□□ -1.91
VCPP55072 AL390023.1-201ENST00000428836 262 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC109583.1-201ENST00000432156 268 ntBASIC3.09□□□□□ -1.91
VCPP55072 AL590639.1-201ENST00000456484 337 ntBASIC3.09□□□□□ -1.91
VCPP55072 RNU7-136P-201ENST00000458819 69 ntBASIC3.09□□□□□ -1.91
VCPP55072 SNORD109B-201ENST00000458961 67 ntBASIC3.09□□□□□ -1.91
VCPP55072 SNORD109A-201ENST00000459128 67 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC128713.1-201ENST00000471495 306 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPP55072 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.09□□□□□ -1.91
VCPP55072 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
VCPP55072 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPP55072 ANXA2P1-201ENST00000505539 926 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPP55072 SCGB1D5P-201ENST00000515134 247 ntBASIC3.09□□□□□ -1.91
VCPP55072 RNU5A-4P-201ENST00000516588 111 ntBASIC3.09□□□□□ -1.91
VCPP55072 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
VCPP55072 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.09□□□□□ -1.91
VCPP55072 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VCPP55072 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VCPP55072 AC023050.2-201ENST00000544968 387 ntBASIC3.09□□□□□ -1.91
VCPP55072 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
VCPP55072 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.09□□□□□ -1.91
VCPP55072 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.09□□□□□ -1.91
VCPP55072 CYCSP2-201ENST00000558168 301 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC087465.1-201ENST00000560574 245 ntBASIC3.09□□□□□ -1.91
VCPP55072 GLUD1P4-201ENST00000590914 418 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.09□□□□□ -1.91
VCPP55072 AC234772.3-201ENST00000602277 528 ntBASIC3.09□□□□□ -1.91
VCPP55072 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
VCPP55072 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VCPP55072 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
VCPP55072 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPP55072 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
VCPP55072 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms