Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
COPAP53621 AL603758.1-201ENST00000618654 241 ntBASIC4.03□□□□□ -1.76
COPAP53621 AC091905.1-201ENST00000624400 311 ntBASIC4.03□□□□□ -1.76
COPAP53621 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
COPAP53621 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.03□□□□□ -1.76
COPAP53621 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
COPAP53621 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.77
COPAP53621 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.03□□□□□ -1.77
COPAP53621 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.02□□□□□ -1.77
COPAP53621 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPAP53621 NCAPGP1-201ENST00000505112 1814 ntBASIC4.02□□□□□ -1.77
COPAP53621 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COPAP53621 AL161912.2-201ENST00000565707 3007 ntBASIC4.02□□□□□ -1.77
COPAP53621 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.02□□□□□ -1.77
COPAP53621 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.02□□□□□ -1.77
COPAP53621 Y_RNA.9-201ENST00000362354 101 ntBASIC4.02□□□□□ -1.77
COPAP53621 RNU6-181P-201ENST00000363225 107 ntBASIC4.02□□□□□ -1.77
COPAP53621 Y_RNA.248-201ENST00000364501 109 ntBASIC4.02□□□□□ -1.77
COPAP53621 Y_RNA.372-201ENST00000365599 102 ntBASIC4.02□□□□□ -1.77
COPAP53621 MIR30B-201ENST00000384850 88 ntBASIC4.02□□□□□ -1.77
COPAP53621 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COPAP53621 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
COPAP53621 RNA5SP107-201ENST00000411358 122 ntBASIC4.02□□□□□ -1.77
COPAP53621 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.02□□□□□ -1.77
COPAP53621 RPL7AP73-201ENST00000413490 353 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
COPAP53621 GOT2P5-201ENST00000433995 546 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC090774.1-201ENST00000435925 246 ntBASIC4.02□□□□□ -1.77
COPAP53621 NOTCH2P1-201ENST00000443481 624 ntBASIC4.02□□□□□ -1.77
COPAP53621 AL358232.1-201ENST00000448030 501 ntBASIC4.02□□□□□ -1.77
COPAP53621 NANOGP10-201ENST00000453325 895 ntBASIC4.02□□□□□ -1.77
COPAP53621 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
COPAP53621 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPAP53621 AC023194.1-201ENST00000493084 308 ntBASIC4.02□□□□□ -1.77
COPAP53621 RN7SL323P-201ENST00000494712 295 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.02□□□□□ -1.77
COPAP53621 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.02□□□□□ -1.77
COPAP53621 RNU6-445P-201ENST00000516949 107 ntBASIC4.02□□□□□ -1.77
COPAP53621 RNU6-64P-201ENST00000517119 105 ntBASIC4.02□□□□□ -1.77
COPAP53621 TRMT10BP1-201ENST00000519377 943 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC022616.3-201ENST00000523940 148 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC011979.2-201ENST00000527568 352 ntBASIC4.02□□□□□ -1.77
COPAP53621 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.02□□□□□ -1.77
COPAP53621 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.02□□□□□ -1.77
COPAP53621 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.02□□□□□ -1.77
COPAP53621 TUG1_2.1-201ENST00000614234 87 ntBASIC4.02□□□□□ -1.77
COPAP53621 MIR6075-201ENST00000620782 95 ntBASIC4.02□□□□□ -1.77
COPAP53621 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPAP53621 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
COPAP53621 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
COPAP53621 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COPAP53621 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.01□□□□□ -1.77
COPAP53621 PRO1804-201ENST00000623780 2050 ntBASIC4.01□□□□□ -1.77
COPAP53621 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPAP53621 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.01□□□□□ -1.77
COPAP53621 SNORA71.3-201ENST00000362582 128 ntBASIC4.01□□□□□ -1.77
COPAP53621 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
COPAP53621 RNU6-173P-201ENST00000364215 104 ntBASIC4.01□□□□□ -1.77
COPAP53621 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.01□□□□□ -1.77
COPAP53621 RNU6-282P-201ENST00000365357 103 ntBASIC4.01□□□□□ -1.77
COPAP53621 CIR1P3-201ENST00000405137 479 ntBASIC4.01□□□□□ -1.77
COPAP53621 RAB9AP3-201ENST00000412737 573 ntBASIC4.01□□□□□ -1.77
COPAP53621 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 MTCO1P39-201ENST00000426148 480 ntBASIC4.01□□□□□ -1.77
COPAP53621 MTCO2P11-201ENST00000431069 680 ntBASIC4.01□□□□□ -1.77
COPAP53621 AL596276.1-201ENST00000434465 418 ntBASIC4.01□□□□□ -1.77
COPAP53621 HMGN2P20-201ENST00000437531 273 ntBASIC4.01□□□□□ -1.77
COPAP53621 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 AC132479.1-201ENST00000449160 144 ntBASIC4.01□□□□□ -1.77
COPAP53621 AL162389.1-201ENST00000449233 177 ntBASIC4.01□□□□□ -1.77
COPAP53621 RAB9AP1-201ENST00000449393 573 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC003071.1-201ENST00000451219 789 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.01□□□□□ -1.77
COPAP53621 AC013267.1-201ENST00000458227 267 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC079382.1-201ENST00000493346 557 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 VN1R104P-201ENST00000505115 1009 ntBASIC4.01□□□□□ -1.77
COPAP53621 BTF3L4P4-201ENST00000506381 449 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COPAP53621 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.01□□□□□ -1.77
COPAP53621 AC004067.1-201ENST00000608733 700 ntBASIC4.01□□□□□ -1.77
COPAP53621 AC092954.2-201ENST00000609103 430 ntBASIC4.01□□□□□ -1.77
COPAP53621 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 PLCE1P1-201ENST00000622094 305 ntBASIC4.01□□□□□ -1.77
COPAP53621 AL136164.4-201ENST00000625013 2135 ntBASIC4.01□□□□□ -1.77
COPAP53621 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPAP53621 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.01□□□□□ -1.77
COPAP53621 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPAP53621 AC002546.1-201ENST00000588041 2504 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms