Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TBCAP3-201ENST00000512475 312 ntBASIC5.19□□□□□ -1.58
USP11P51784 RNU6-798P-201ENST00000516912 103 ntBASIC5.19□□□□□ -1.58
USP11P51784 RNU6-64P-201ENST00000517119 105 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.19□□□□□ -1.58
USP11P51784 AC107918.3-201ENST00000533272 382 ntBASIC5.19□□□□□ -1.58
USP11P51784 AL133271.1-201ENST00000538229 291 ntBASIC5.19□□□□□ -1.58
USP11P51784 GNAI2P1-201ENST00000541815 315 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC084783.1-201ENST00000565846 910 ntBASIC5.19□□□□□ -1.58
USP11P51784 MIR5692C1-201ENST00000585309 91 ntBASIC5.19□□□□□ -1.58
USP11P51784 HMGB2P1-201ENST00000591146 634 ntBASIC5.19□□□□□ -1.58
USP11P51784 AP000346.3-201ENST00000622821 210 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC067931.1-201ENST00000624190 671 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC055839.1-201ENST00000634467 498 ntBASIC5.19□□□□□ -1.58
USP11P51784 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.19□□□□□ -1.58
USP11P51784 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP11P51784 ZNF734P-201ENST00000419494 1534 ntBASIC5.18□□□□□ -1.58
USP11P51784 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
USP11P51784 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP11P51784 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.18□□□□□ -1.58
USP11P51784 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP11P51784 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.18□□□□□ -1.58
USP11P51784 AC107027.3-201ENST00000565095 3473 ntBASIC5.18□□□□□ -1.58
USP11P51784 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP11P51784 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
USP11P51784 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.18□□□□□ -1.58
USP11P51784 RHOT1P2-201ENST00000366423 333 ntBASIC5.18□□□□□ -1.58
USP11P51784 MIR129-1-201ENST00000384972 72 ntBASIC5.18□□□□□ -1.58
USP11P51784 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP11P51784 RPL30P2-201ENST00000414021 291 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC069213.2-201ENST00000420238 366 ntBASIC5.18□□□□□ -1.58
USP11P51784 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 RPL7P37-201ENST00000425095 738 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC093106.2-201ENST00000428212 385 ntBASIC5.18□□□□□ -1.58
USP11P51784 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.18□□□□□ -1.58
USP11P51784 HMGB1P9-201ENST00000429856 646 ntBASIC5.18□□□□□ -1.58
USP11P51784 EZH2P1-201ENST00000431167 291 ntBASIC5.18□□□□□ -1.58
USP11P51784 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.18□□□□□ -1.58
USP11P51784 HSFY6P-201ENST00000445573 403 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC239809.1-201ENST00000450470 217 ntBASIC5.18□□□□□ -1.58
USP11P51784 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 DYNLL1P5-201ENST00000467158 270 ntBASIC5.18□□□□□ -1.58
USP11P51784 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.18□□□□□ -1.58
USP11P51784 SLC25A15P5-201ENST00000508033 253 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 RNY3P15-201ENST00000516297 97 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC090115.3-201ENST00000553218 849 ntBASIC5.18□□□□□ -1.58
USP11P51784 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.18□□□□□ -1.58
USP11P51784 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 MIR4293-201ENST00000584305 78 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC110743.1-201ENST00000584870 478 ntBASIC5.18□□□□□ -1.58
USP11P51784 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP11P51784 AC092447.9-201ENST00000603395 144 ntBASIC5.18□□□□□ -1.58
USP11P51784 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.18□□□□□ -1.58
USP11P51784 ATP1B3P1-201ENST00000605365 821 ntBASIC5.18□□□□□ -1.58
USP11P51784 AC012443.1-201ENST00000605605 231 ntBASIC5.18□□□□□ -1.58
USP11P51784 SNORD58B-201ENST00000607313 66 ntBASIC5.18□□□□□ -1.58
USP11P51784 AL590099.1-201ENST00000615276 138 ntBASIC5.18□□□□□ -1.58
USP11P51784 ATP5A1P2-202ENST00000616464 443 ntBASIC5.18□□□□□ -1.58
USP11P51784 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.18□□□□□ -1.58
USP11P51784 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.18□□□□□ -1.58
USP11P51784 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.18□□□□□ -1.58
USP11P51784 AC074029.4-201ENST00000624796 1859 ntBASIC5.17□□□□□ -1.58
USP11P51784 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.17□□□□□ -1.58
USP11P51784 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP11P51784 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP11P51784 RNU6-874P-201ENST00000362390 105 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNU1-35P-201ENST00000362782 153 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNA5SP391-201ENST00000363456 119 ntBASIC5.17□□□□□ -1.58
USP11P51784 SNORD82-201ENST00000365530 70 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNU6-1062P-201ENST00000383908 107 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNU6-472P-201ENST00000384299 107 ntBASIC5.17□□□□□ -1.58
USP11P51784 Y_RNA.493-201ENST00000384422 102 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNA5SP332-201ENST00000391063 115 ntBASIC5.17□□□□□ -1.58
USP11P51784 Z74021.1-201ENST00000423610 407 ntBASIC5.17□□□□□ -1.58
USP11P51784 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP11P51784 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.17□□□□□ -1.58
USP11P51784 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.17□□□□□ -1.58
USP11P51784 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.17□□□□□ -1.58
USP11P51784 RBBP4P6-201ENST00000508098 202 ntBASIC5.17□□□□□ -1.58
USP11P51784 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.17□□□□□ -1.58
USP11P51784 RNA5SP384-201ENST00000516615 116 ntBASIC5.17□□□□□ -1.58
USP11P51784 RNU4-77P-201ENST00000516692 156 ntBASIC5.17□□□□□ -1.58
USP11P51784 SNORD116.3-201ENST00000517176 78 ntBASIC5.17□□□□□ -1.58
USP11P51784 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.17□□□□□ -1.58
USP11P51784 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.17□□□□□ -1.58
USP11P51784 AL121576.1-201ENST00000556055 276 ntBASIC5.17□□□□□ -1.58
USP11P51784 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.17□□□□□ -1.58
USP11P51784 BPIFA4P-203ENST00000603168 689 ntBASIC5.17□□□□□ -1.58
USP11P51784 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP11P51784 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.17□□□□□ -1.58
USP11P51784 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USP11P51784 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP11P51784 AP001273.1-201ENST00000624493 3152 ntBASIC5.17□□□□□ -1.58
USP11P51784 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP11P51784 CPHL1P-201ENST00000461341 3407 ntBASIC5.17□□□□□ -1.58
USP11P51784 AL445437.1-201ENST00000623157 3087 ntBASIC5.17□□□□□ -1.58
USP11P51784 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms