Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AP001429.1-201ENST00000602568 530 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC005000.2-201ENST00000605468 310 ntBASIC1.62□□□□□ -2.15
RPL28P46779 SCARNA17.4-201ENST00000614296 143 ntBASIC1.62□□□□□ -2.15
RPL28P46779 AC245884.12-201ENST00000615364 59 ntBASIC1.62□□□□□ -2.15
RPL28P46779 HPVC1-201ENST00000629899 1198 ntBASIC1.62□□□□□ -2.15
RPL28P46779 CU459211.1-201ENST00000635667 749 ntBASIC1.62□□□□□ -2.15
RPL28P46779 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPL28P46779 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RPL28P46779 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPL28P46779 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
RPL28P46779 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RPL28P46779 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPL28P46779 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.61□□□□□ -2.15
RPL28P46779 SNORA51.11-201ENST00000384442 131 ntBASIC1.61□□□□□ -2.15
RPL28P46779 MIR196B-201ENST00000384852 84 ntBASIC1.61□□□□□ -2.15
RPL28P46779 MTND3P20-201ENST00000407663 186 ntBASIC1.61□□□□□ -2.15
RPL28P46779 RNU6-1328P-201ENST00000410938 106 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL28P46779 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
RPL28P46779 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.61□□□□□ -2.15
RPL28P46779 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.61□□□□□ -2.15
RPL28P46779 Z75741.2-201ENST00000417272 1167 ntBASIC1.61□□□□□ -2.15
RPL28P46779 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.61□□□□□ -2.15
RPL28P46779 SEPT2P1-201ENST00000419651 180 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AC019097.1-201ENST00000424783 735 ntBASIC1.61□□□□□ -2.15
RPL28P46779 MTCYBP15-201ENST00000433123 1127 ntBASIC1.61□□□□□ -2.15
RPL28P46779 MTCYBP11-201ENST00000447254 1109 ntBASIC1.61□□□□□ -2.15
RPL28P46779 RPL39P6-201ENST00000448289 150 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AC011753.1-201ENST00000451001 220 ntBASIC1.61□□□□□ -2.15
RPL28P46779 MRPL42P4-201ENST00000453267 443 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AP1S2P1-201ENST00000457344 379 ntBASIC1.61□□□□□ -2.15
RPL28P46779 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.61□□□□□ -2.15
RPL28P46779 HSPA8P13-201ENST00000523715 472 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RPL28P46779 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RPL28P46779 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL28P46779 AC078814.3-201ENST00000553036 491 ntBASIC1.61□□□□□ -2.15
RPL28P46779 HSPE1P3-201ENST00000559254 309 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AC079148.1-201ENST00000565944 819 ntBASIC1.61□□□□□ -2.15
RPL28P46779 ISCA1P3-201ENST00000577104 373 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.61□□□□□ -2.15
RPL28P46779 AP001542.2-201ENST00000593141 364 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AL161729.4-201ENST00000604650 476 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AL160281.1-201ENST00000605307 311 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AC026741.1-201ENST00000605892 482 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.61□□□□□ -2.15
RPL28P46779 AL596245.1-201ENST00000618994 362 ntBASIC1.61□□□□□ -2.15
RPL28P46779 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.61□□□□□ -2.15
RPL28P46779 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL28P46779 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPL28P46779 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPL28P46779 MIR21-201ENST00000362134 72 ntBASIC1.6□□□□□ -2.15
RPL28P46779 SNORD114-30-201ENST00000364448 72 ntBASIC1.6□□□□□ -2.15
RPL28P46779 RNU6-741P-201ENST00000383889 107 ntBASIC1.6□□□□□ -2.15
RPL28P46779 RNU6-301P-201ENST00000384277 107 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL360182.1-201ENST00000397433 468 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL513331.1-201ENST00000411908 397 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 MTATP6P27-201ENST00000416987 621 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 ARL5AP4-201ENST00000430731 512 ntBASIC1.6□□□□□ -2.15
RPL28P46779 USP12PX-201ENST00000432383 1057 ntBASIC1.6□□□□□ -2.15
RPL28P46779 ATP5F1P1-201ENST00000433775 569 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL28P46779 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 CBWD4P-201ENST00000445695 655 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 AL500527.1-201ENST00000448532 255 ntBASIC1.6□□□□□ -2.15
RPL28P46779 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 OFD1P3Y-201ENST00000453312 783 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.6□□□□□ -2.15
RPL28P46779 MRPS17P3-201ENST00000465453 385 ntBASIC1.6□□□□□ -2.15
RPL28P46779 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPL28P46779 AC090453.1-201ENST00000495560 436 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC022447.3-201ENST00000506865 495 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.6□□□□□ -2.15
RPL28P46779 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.6□□□□□ -2.15
RPL28P46779 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.6□□□□□ -2.15
RPL28P46779 RNU6-1261P-201ENST00000517194 104 ntBASIC1.6□□□□□ -2.15
RPL28P46779 GTF3AP2-201ENST00000557014 266 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC044913.1-201ENST00000557200 430 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC009127.3-201ENST00000570531 403 ntBASIC1.6□□□□□ -2.15
RPL28P46779 MIR4637-201ENST00000582405 84 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RPL28P46779 AC090330.1-201ENST00000588646 764 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.6□□□□□ -2.15
RPL28P46779 RPS15AP11-201ENST00000594193 385 ntBASIC1.6□□□□□ -2.15
RPL28P46779 VN1R78P-201ENST00000597393 564 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL035411.2-201ENST00000604022 421 ntBASIC1.6□□□□□ -2.15
RPL28P46779 ATP1B3P1-201ENST00000605365 821 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL121917.1-203ENST00000605534 577 ntBASIC1.6□□□□□ -2.15
RPL28P46779 OR2AS2P-201ENST00000606902 342 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC010975.3-201ENST00000618727 978 ntBASIC1.6□□□□□ -2.15
RPL28P46779 U4.3-201ENST00000621047 82 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL118508.4-201ENST00000624142 1176 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC006386.2-201ENST00000624491 75 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AC012005.1-201ENST00000624575 75 ntBASIC1.6□□□□□ -2.15
RPL28P46779 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms