Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC093899.1-201ENST00000457984 376 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 RBM43P1-201ENST00000476891 1081 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC126182.1-201ENST00000478134 357 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 RPL30P5-201ENST00000494923 336 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC020893.1-201ENST00000502452 580 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC010587.1-201ENST00000505809 469 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.03□□□□□ -1.92
NKX2-1P43699 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.03□□□□□ -1.92
NKX2-1P43699 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC093012.1-202ENST00000549403 582 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX2-1P43699 AC023575.1-201ENST00000580510 358 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AL592436.1-201ENST00000605135 558 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC103710.2-201ENST00000609912 942 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC017083.3-201ENST00000609955 700 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC010133.1-201ENST00000615809 842 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AL445567.2-201ENST00000618935 498 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AC124864.2-201ENST00000624736 186 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 AL732372.2-225ENST00000642124 456 ntBASIC3.03□□□□□ -1.92
NKX2-1P43699 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX2-1P43699 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
NKX2-1P43699 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.03□□□□□ -1.93
NKX2-1P43699 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
NKX2-1P43699 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.03□□□□□ -1.93
NKX2-1P43699 AC091152.2-201ENST00000591628 2569 ntBASIC3.03□□□□□ -1.93
NKX2-1P43699 AL137003.2-201ENST00000606924 2538 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.02□□□□□ -1.93
NKX2-1P43699 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NKX2-1P43699 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 RNU6-511P-201ENST00000363496 107 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 RNU6-1097P-201ENST00000363586 107 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 MIR493-201ENST00000385254 89 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 RNU6-1197P-201ENST00000391183 107 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 GSTA9P-201ENST00000406231 611 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 RN7SKP159-201ENST00000410657 292 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 RNA5SP107-201ENST00000411358 122 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AL513331.1-201ENST00000411908 397 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AL807761.1-201ENST00000417622 171 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 BX842559.1-201ENST00000419615 532 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-1P43699 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 TMEM167AP1-201ENST00000423409 219 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 NDUFB1P1-201ENST00000435191 180 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 TAAR7P-201ENST00000436141 242 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC009237.8-201ENST00000445492 379 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX2-1P43699 MRPS31P2-201ENST00000451581 518 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-1P43699 MTND2P24-201ENST00000453434 806 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 U3.44-201ENST00000458938 192 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-1P43699 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.02□□□□□ -1.93
NKX2-1P43699 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX2-1P43699 SAP18P1-201ENST00000512058 390 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 RNU6-64P-201ENST00000517119 105 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 NRON-201ENST00000517270 370 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-1P43699 OR5G4P-201ENST00000525251 760 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 ATP5F1P5-201ENST00000526403 760 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 HIGD1AP5-201ENST00000529959 259 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AP003034.1-201ENST00000534621 422 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-1P43699 AC087883.1-201ENST00000551882 391 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC124947.2-202ENST00000552735 133 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX2-1P43699 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-1P43699 MIR4474-201ENST00000579189 78 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX2-1P43699 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-1P43699 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX2-1P43699 AC008498.1-201ENST00000613012 531 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 MIR6716-201ENST00000613413 80 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC090132.2-201ENST00000615881 347 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 MIR6076-201ENST00000617521 113 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 FRG1KP-201ENST00000623592 341 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 AC005609.4-201ENST00000625071 447 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.02□□□□□ -1.93
NKX2-1P43699 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX2-1P43699 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms