Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL109933.3-201ENST00000619095 188 ntBASIC1.26□□□□□ -2.21
HTTP42858 AL356118.1-201ENST00000635272 1078 ntBASIC1.26□□□□□ -2.21
HTTP42858 MTND5P9-201ENST00000503854 1755 ntBASIC1.26□□□□□ -2.21
HTTP42858 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.26□□□□□ -2.21
HTTP42858 AC018630.2-202ENST00000422992 927 ntBASIC1.26□□□□□ -2.21
HTTP42858 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.26□□□□□ -2.21
HTTP42858 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.26□□□□□ -2.21
HTTP42858 U73023.1-201ENST00000603134 700 ntBASIC1.26□□□□□ -2.21
HTTP42858 MIR2909-201ENST00000617113 69 ntBASIC1.26□□□□□ -2.21
HTTP42858 MFSD8-213ENST00000641134 1327 ntBASIC1.26□□□□□ -2.21
HTTP42858 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HTTP42858 MIR365B-201ENST00000362317 111 ntBASIC1.25□□□□□ -2.21
HTTP42858 AL096701.2-201ENST00000416920 238 ntBASIC1.25□□□□□ -2.21
HTTP42858 AL445687.1-201ENST00000439946 251 ntBASIC1.25□□□□□ -2.21
HTTP42858 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.25□□□□□ -2.21
HTTP42858 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.25□□□□□ -2.21
HTTP42858 AL590095.2-201ENST00000604136 117 ntBASIC1.25□□□□□ -2.21
HTTP42858 MTND4LP5-201ENST00000605152 292 ntBASIC1.25□□□□□ -2.21
HTTP42858 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.25□□□□□ -2.21
HTTP42858 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HTTP42858 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.25□□□□□ -2.21
HTTP42858 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
HTTP42858 MIR532-201ENST00000385025 91 ntBASIC1.25□□□□□ -2.21
HTTP42858 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
HTTP42858 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.25□□□□□ -2.21
HTTP42858 AC073901.1-201ENST00000462471 408 ntBASIC1.25□□□□□ -2.21
HTTP42858 MAGOH2P-202ENST00000584384 429 ntBASIC1.25□□□□□ -2.21
HTTP42858 uc_338.20-201ENST00000621563 178 ntBASIC1.25□□□□□ -2.21
HTTP42858 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HTTP42858 AP001486.2-201ENST00000561652 5113 ntBASIC1.24□□□□□ -2.21
HTTP42858 RNA5SP127-201ENST00000411051 133 ntBASIC1.24□□□□□ -2.21
HTTP42858 MTND5P25-201ENST00000430499 799 ntBASIC1.24□□□□□ -2.21
HTTP42858 HAUS1P1-201ENST00000505275 832 ntBASIC1.24□□□□□ -2.21
HTTP42858 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.24□□□□□ -2.21
HTTP42858 AC008850.1-201ENST00000427546 362 ntBASIC1.24□□□□□ -2.21
HTTP42858 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.24□□□□□ -2.21
HTTP42858 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HTTP42858 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HTTP42858 HSPE1P4-201ENST00000550617 308 ntBASIC1.24□□□□□ -2.21
HTTP42858 AC233266.2-201ENST00000567067 528 ntBASIC1.24□□□□□ -2.21
HTTP42858 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.24□□□□□ -2.21
HTTP42858 XIAPP3-201ENST00000312918 795 ntBASIC1.24□□□□□ -2.21
HTTP42858 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
HTTP42858 AC010265.1-201ENST00000513509 211 ntBASIC1.24□□□□□ -2.21
HTTP42858 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
HTTP42858 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.24□□□□□ -2.21
HTTP42858 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.23□□□□□ -2.21
HTTP42858 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.23□□□□□ -2.21
HTTP42858 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.23□□□□□ -2.21
HTTP42858 MTCO2P9-201ENST00000503214 694 ntBASIC1.23□□□□□ -2.21
HTTP42858 AC022447.3-201ENST00000506865 495 ntBASIC1.23□□□□□ -2.21
HTTP42858 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.23□□□□□ -2.21
HTTP42858 AC093281.2-201ENST00000510153 597 ntBASIC1.23□□□□□ -2.21
HTTP42858 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
HTTP42858 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
HTTP42858 AC116618.1-201ENST00000634617 774 ntBASIC1.23□□□□□ -2.21
HTTP42858 RNF6P1-201ENST00000444889 1784 ntBASIC1.23□□□□□ -2.21
HTTP42858 RNU6-203P-201ENST00000384038 104 ntBASIC1.23□□□□□ -2.21
HTTP42858 AL030996.1-201ENST00000411430 235 ntBASIC1.23□□□□□ -2.21
HTTP42858 RPL7P53-201ENST00000421245 739 ntBASIC1.23□□□□□ -2.21
HTTP42858 RPS27AP10-201ENST00000496103 208 ntBASIC1.23□□□□□ -2.21
HTTP42858 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
HTTP42858 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HTTP42858 AC244636.1-201ENST00000421152 228 ntBASIC1.22□□□□□ -2.21
HTTP42858 AL596276.1-201ENST00000434465 418 ntBASIC1.22□□□□□ -2.21
HTTP42858 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.22□□□□□ -2.21
HTTP42858 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.22□□□□□ -2.21
HTTP42858 RNU4-60P-201ENST00000517239 135 ntBASIC1.22□□□□□ -2.21
HTTP42858 SNORD114-23-201ENST00000363536 72 ntBASIC1.22□□□□□ -2.21
HTTP42858 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.22□□□□□ -2.21
HTTP42858 RNU1-52P-201ENST00000384190 164 ntBASIC1.22□□□□□ -2.21
HTTP42858 RPS27P1-201ENST00000450552 247 ntBASIC1.22□□□□□ -2.21
HTTP42858 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.22□□□□□ -2.21
HTTP42858 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.22□□□□□ -2.21
HTTP42858 EEF1B2P4-201ENST00000551398 348 ntBASIC1.22□□□□□ -2.21
HTTP42858 AC012531.5-201ENST00000611375 151 ntBASIC1.22□□□□□ -2.21
HTTP42858 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.22□□□□□ -2.21
HTTP42858 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
HTTP42858 AC007098.1-201ENST00000420122 367 ntBASIC1.21□□□□□ -2.22
HTTP42858 HMGN2P38-201ENST00000423806 265 ntBASIC1.21□□□□□ -2.22
HTTP42858 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.21□□□□□ -2.22
HTTP42858 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
HTTP42858 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.21□□□□□ -2.22
HTTP42858 CBX3P6-201ENST00000430257 527 ntBASIC1.21□□□□□ -2.22
HTTP42858 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.21□□□□□ -2.22
HTTP42858 AC004022.1-201ENST00000447766 1066 ntBASIC1.21□□□□□ -2.22
HTTP42858 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
HTTP42858 AC025918.2-201ENST00000558683 763 ntBASIC1.21□□□□□ -2.22
HTTP42858 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.21□□□□□ -2.22
HTTP42858 AC010928.2-201ENST00000588017 287 ntBASIC1.21□□□□□ -2.22
HTTP42858 DUXAP11-201ENST00000603858 526 ntBASIC1.21□□□□□ -2.22
HTTP42858 MIR924-201ENST00000638017 53 ntBASIC1.21□□□□□ -2.22
HTTP42858 AC090740.1-201ENST00000623193 2262 ntBASIC1.21□□□□□ -2.22
HTTP42858 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HTTP42858 MIR330-201ENST00000362196 94 ntBASIC1.2□□□□□ -2.22
HTTP42858 AL591212.2-201ENST00000433923 257 ntBASIC1.2□□□□□ -2.22
HTTP42858 USP9YP7-201ENST00000436723 430 ntBASIC1.2□□□□□ -2.22
HTTP42858 USP9YP32-201ENST00000452432 430 ntBASIC1.2□□□□□ -2.22
HTTP42858 AC006483.1-201ENST00000487308 313 ntBASIC1.2□□□□□ -2.22
HTTP42858 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms