Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 RNA5SP354-201ENST00000391247 136 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AL512844.2-201ENST00000433990 593 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 NANOGP2-201ENST00000435391 727 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 RPS3AP12-201ENST00000443616 753 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.63□□□□□ -1.99
FDFT1P37268 MTCO2P25-201ENST00000447065 681 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.63□□□□□ -1.99
FDFT1P37268 AC097493.1-201ENST00000463958 372 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 MTND4LP3-201ENST00000468320 276 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.63□□□□□ -1.99
FDFT1P37268 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 OR5BM1P-201ENST00000512021 366 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AC006499.2-201ENST00000513470 337 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.63□□□□□ -1.99
FDFT1P37268 RNU6-928P-201ENST00000516876 104 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.63□□□□□ -1.99
FDFT1P37268 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FDFT1P37268 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FDFT1P37268 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.63□□□□□ -1.99
FDFT1P37268 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.63□□□□□ -1.99
FDFT1P37268 AL512347.1-201ENST00000566420 503 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.63□□□□□ -1.99
FDFT1P37268 ELOCP29-201ENST00000588193 334 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AC103798.2-201ENST00000624292 632 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.63□□□□□ -1.99
FDFT1P37268 AL049641.1-201ENST00000441055 1948 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
FDFT1P37268 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FDFT1P37268 AL079343.1-201ENST00000572358 1771 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FDFT1P37268 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
FDFT1P37268 MTCO1P9-201ENST00000505577 1534 ntBASIC2.63□□□□□ -1.99
FDFT1P37268 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FDFT1P37268 RNU6-1180P-201ENST00000364935 107 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 MIR514A1-201ENST00000385133 98 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FDFT1P37268 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FDFT1P37268 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 BX682237.1-201ENST00000415016 335 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.62□□□□□ -1.99
FDFT1P37268 RPL23AP83-201ENST00000434984 473 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC107083.1-201ENST00000439643 279 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 RPS12P2-201ENST00000439728 269 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 BMI1P1-201ENST00000445879 941 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC007327.1-201ENST00000447461 264 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 ARPC3P5-201ENST00000448802 534 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 BX322784.1-201ENST00000455793 1077 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.62□□□□□ -1.99
FDFT1P37268 snoU13.8-201ENST00000458890 104 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC026801.2-201ENST00000515352 425 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 RN7SKP40-201ENST00000517211 242 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC021451.1-201ENST00000523498 1129 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.62□□□□□ -1.99
FDFT1P37268 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC124947.2-202ENST00000552735 133 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.62□□□□□ -1.99
FDFT1P37268 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC090888.1-201ENST00000561335 1141 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.62□□□□□ -1.99
FDFT1P37268 AP001429.1-201ENST00000602568 530 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 BBIP1P1-201ENST00000602999 279 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC004987.4-201ENST00000603383 338 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC068313.1-201ENST00000604028 1008 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC011451.2-201ENST00000604303 598 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 AC008443.7-201ENST00000622195 246 ntBASIC2.62□□□□□ -1.99
FDFT1P37268 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FDFT1P37268 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
FDFT1P37268 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
FDFT1P37268 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FDFT1P37268 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
FDFT1P37268 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.61□□□□□ -1.99
FDFT1P37268 RNU6-560P-201ENST00000364007 108 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 RNU6-1176P-201ENST00000390955 107 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 RNU6-952P-201ENST00000391164 108 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FDFT1P37268 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.61□□□□□ -1.99
FDFT1P37268 AC080125.1-201ENST00000414888 684 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 PPP1R11P2-201ENST00000423543 382 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 MTATP6P14-201ENST00000455189 673 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
FDFT1P37268 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.61□□□□□ -1.99
FDFT1P37268 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 RNU6-528P-201ENST00000516926 100 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.61□□□□□ -1.99
FDFT1P37268 OR5BN1P-201ENST00000532955 829 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 AC243972.3-201ENST00000539655 198 ntBASIC2.61□□□□□ -1.99
FDFT1P37268 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms