Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNORA11.1-201ENST00000408133 129 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCLP35914 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCLP35914 MTND4LP10-201ENST00000435146 291 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AL117351.1-201ENST00000438864 766 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 AC104563.1-201ENST00000476147 376 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 HMGB1P36-201ENST00000487709 576 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 AC022447.3-201ENST00000506865 495 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AC111000.2-201ENST00000507775 550 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 RNU6-232P-201ENST00000517144 64 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HMGCLP35914 AP003497.1-201ENST00000528472 562 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AC068587.4-201ENST00000533893 186 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCLP35914 AC007834.2-201ENST00000536310 343 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AC090615.1-201ENST00000577519 154 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCLP35914 DUXAP4-201ENST00000603046 613 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 XIAPP1-201ENST00000603162 600 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 MIR7844-201ENST00000616161 122 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 ATP5A1P2-202ENST00000616464 443 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 AC068057.2-201ENST00000624047 895 ntBASIC2.91□□□□□ -1.94
HMGCLP35914 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.91□□□□□ -1.94
HMGCLP35914 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCLP35914 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCLP35914 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCLP35914 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCLP35914 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HMGCLP35914 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HMGCLP35914 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HMGCLP35914 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGCLP35914 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
HMGCLP35914 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 Y_RNA.18-201ENST00000362461 102 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCLP35914 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCLP35914 RAD23BP2-201ENST00000416003 1207 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 MTND2P18-201ENST00000419962 1030 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 USP9YP26-201ENST00000421008 661 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 Z99497.1-201ENST00000421282 135 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 AL390023.1-201ENST00000428836 262 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCLP35914 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 COX6CP2-201ENST00000444980 225 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCLP35914 OR6C5P-201ENST00000452388 923 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC011825.1-201ENST00000484967 388 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC023424.2-201ENST00000493479 777 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC096751.1-202ENST00000502691 1067 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 MTCYBP43-201ENST00000513621 740 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCLP35914 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCLP35914 RNU6-714P-201ENST00000516963 103 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 FAM60DP-201ENST00000524174 632 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCLP35914 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCLP35914 OSBPL9P5-201ENST00000542581 171 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCLP35914 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 MIR3200-201ENST00000580767 85 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 AP000403.1-201ENST00000603349 851 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGCLP35914 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGCLP35914 AC002550.2-201ENST00000621246 394 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 AP003122.6-201ENST00000623831 495 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
HMGCLP35914 AC092447.7-201ENST00000422212 1621 ntBASIC2.9□□□□□ -1.95
HMGCLP35914 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.89□□□□□ -1.95
HMGCLP35914 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.89□□□□□ -1.95
HMGCLP35914 AL161781.1-201ENST00000354277 403 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 RNU1-35P-201ENST00000362782 153 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 RNU6-769P-201ENST00000384407 104 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 SNORA44-201ENST00000384584 132 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGCLP35914 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGCLP35914 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGCLP35914 USP9YP36-201ENST00000424581 829 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 RPL23AP83-201ENST00000434984 473 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 CYCSP32-201ENST00000440548 321 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 NANOGNBP1-201ENST00000448444 480 ntBASIC2.89□□□□□ -1.95
HMGCLP35914 AP000542.1-201ENST00000448473 371 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms