Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MIR3609-201ENST00000582661 80 ntBASIC3□□□□□ -1.93
RFC4P35249 AL022067.1-201ENST00000602426 454 ntBASIC3□□□□□ -1.93
RFC4P35249 AC025811.1-201ENST00000604312 472 ntBASIC3□□□□□ -1.93
RFC4P35249 AC104237.2-201ENST00000612456 443 ntBASIC3□□□□□ -1.93
RFC4P35249 AL353997.5-201ENST00000618886 171 ntBASIC3□□□□□ -1.93
RFC4P35249 AL353748.2-201ENST00000622148 471 ntBASIC3□□□□□ -1.93
RFC4P35249 AC099654.8-201ENST00000637757 681 ntBASIC3□□□□□ -1.93
RFC4P35249 Z99496.1-201ENST00000469424 1477 ntBASIC3□□□□□ -1.93
RFC4P35249 DBF4P1-201ENST00000412976 1892 ntBASIC3□□□□□ -1.93
RFC4P35249 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RFC4P35249 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RFC4P35249 RPL7P30-201ENST00000420888 709 ntBASIC2.99□□□□□ -1.93
RFC4P35249 DPRXP1-201ENST00000426312 460 ntBASIC2.99□□□□□ -1.93
RFC4P35249 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.99□□□□□ -1.93
RFC4P35249 MTND2P39-201ENST00000457230 764 ntBASIC2.99□□□□□ -1.93
RFC4P35249 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.99□□□□□ -1.93
RFC4P35249 BOLA3P3-201ENST00000505182 232 ntBASIC2.99□□□□□ -1.93
RFC4P35249 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.99□□□□□ -1.93
RFC4P35249 RNU6-276P-201ENST00000516114 96 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.99□□□□□ -1.93
RFC4P35249 SNRPGP18-201ENST00000553000 214 ntBASIC2.99□□□□□ -1.93
RFC4P35249 MTCYBP27-201ENST00000555160 670 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC138915.2-201ENST00000569776 97 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.99□□□□□ -1.93
RFC4P35249 AC112220.2-201ENST00000605513 533 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC091946.2-201ENST00000606105 291 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.99□□□□□ -1.93
RFC4P35249 AP001521.1-201ENST00000609150 300 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC018645.2-201ENST00000609151 472 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AL049777.1-201ENST00000622740 518 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC004808.1-201ENST00000627671 721 ntBASIC2.99□□□□□ -1.93
RFC4P35249 AC084035.1-201ENST00000634543 607 ntBASIC2.99□□□□□ -1.93
RFC4P35249 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RFC4P35249 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
RFC4P35249 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
RFC4P35249 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
RFC4P35249 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RFC4P35249 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
RFC4P35249 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
RFC4P35249 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.99□□□□□ -1.93
RFC4P35249 AC026241.1-201ENST00000517873 2142 ntBASIC2.98□□□□□ -1.93
RFC4P35249 RNU6-1180P-201ENST00000364935 107 ntBASIC2.98□□□□□ -1.93
RFC4P35249 SUGT1P1-201ENST00000379514 476 ntBASIC2.98□□□□□ -1.93
RFC4P35249 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
RFC4P35249 MTCO1P56-201ENST00000401674 224 ntBASIC2.98□□□□□ -1.93
RFC4P35249 LUZP4P1-201ENST00000415420 344 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.98□□□□□ -1.93
RFC4P35249 NDUFB4P6-201ENST00000436819 366 ntBASIC2.98□□□□□ -1.93
RFC4P35249 RPL23AP74-201ENST00000437246 471 ntBASIC2.98□□□□□ -1.93
RFC4P35249 COX6CP2-201ENST00000444980 225 ntBASIC2.98□□□□□ -1.93
RFC4P35249 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
RFC4P35249 AC092757.1-201ENST00000467293 467 ntBASIC2.98□□□□□ -1.93
RFC4P35249 MTND3P3-201ENST00000505004 126 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.98□□□□□ -1.93
RFC4P35249 RNA5SP76-201ENST00000516277 87 ntBASIC2.98□□□□□ -1.93
RFC4P35249 Y_RNA.676-201ENST00000516393 96 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC104986.1-201ENST00000517978 436 ntBASIC2.98□□□□□ -1.93
RFC4P35249 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.98□□□□□ -1.93
RFC4P35249 HSPE1P20-201ENST00000538133 289 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC123904.3-201ENST00000547218 814 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC008127.2-201ENST00000549925 1075 ntBASIC2.98□□□□□ -1.93
RFC4P35249 SETP2-201ENST00000553886 926 ntBASIC2.98□□□□□ -1.93
RFC4P35249 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.98□□□□□ -1.93
RFC4P35249 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.98□□□□□ -1.93
RFC4P35249 AC009977.1-201ENST00000586015 570 ntBASIC2.98□□□□□ -1.93
RFC4P35249 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.98□□□□□ -1.93
RFC4P35249 AL022099.1-201ENST00000604551 712 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AF129408.1-201ENST00000608767 431 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AL161629.2-201ENST00000615347 275 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AL158163.2-201ENST00000619110 700 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC084824.4-201ENST00000620106 731 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC109454.4-201ENST00000623411 649 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC091925.2-201ENST00000625059 256 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AP003485.1-201ENST00000625093 753 ntBASIC2.98□□□□□ -1.93
RFC4P35249 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.98□□□□□ -1.93
RFC4P35249 AC013437.2-201ENST00000639587 677 ntBASIC2.98□□□□□ -1.93
RFC4P35249 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RFC4P35249 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.98□□□□□ -1.93
RFC4P35249 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RFC4P35249 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFC4P35249 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
RFC4P35249 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.97□□□□□ -1.93
RFC4P35249 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
RFC4P35249 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFC4P35249 MTCO2P17-201ENST00000424336 677 ntBASIC2.97□□□□□ -1.93
RFC4P35249 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.97□□□□□ -1.93
RFC4P35249 GTF2IP3-201ENST00000433887 494 ntBASIC2.97□□□□□ -1.93
RFC4P35249 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.97□□□□□ -1.93
RFC4P35249 TRBV1-201ENST00000476502 284 ntBASIC2.97□□□□□ -1.93
RFC4P35249 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RFC4P35249 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.97□□□□□ -1.93
RFC4P35249 SNORA70.16-201ENST00000516390 95 ntBASIC2.97□□□□□ -1.93
RFC4P35249 AP001189.2-201ENST00000527320 189 ntBASIC2.97□□□□□ -1.93
RFC4P35249 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.97□□□□□ -1.93
RFC4P35249 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.97□□□□□ -1.93
RFC4P35249 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.97□□□□□ -1.93
RFC4P35249 AC090695.1-201ENST00000561269 1222 ntBASIC2.97□□□□□ -1.93
RFC4P35249 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.97□□□□□ -1.93
RFC4P35249 AL158050.2-201ENST00000605336 568 ntBASIC2.97□□□□□ -1.93
RFC4P35249 RPL23AP88-201ENST00000605759 454 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms