Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNA1P35221 RNU6-1180P-201ENST00000364935 107 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 RNU6-723P-201ENST00000383973 107 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 RPL7P25-201ENST00000404151 721 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 RNA5SP344-201ENST00000411081 104 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AC109583.1-201ENST00000432156 268 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA1P35221 CYCSP32-201ENST00000440548 321 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AC016696.1-201ENST00000446949 318 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AL590639.1-201ENST00000456484 337 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA1P35221 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 HSPD1P15-201ENST00000505573 1122 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 SAP18P1-201ENST00000512058 390 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 MTND5P4-201ENST00000514978 288 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AC105185.1-201ENST00000518705 535 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA1P35221 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNA1P35221 VN1R92P-201ENST00000598511 928 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA1P35221 FTX_3.1-201ENST00000610451 147 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
CTNNA1P35221 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTNNA1P35221 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
CTNNA1P35221 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTNNA1P35221 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CTNNA1P35221 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 CCT4P2-201ENST00000233836 1548 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTNNA1P35221 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTNNA1P35221 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTNNA1P35221 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 MIR627-201ENST00000384979 97 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 PIGPP2-201ENST00000411569 458 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 RPL21P24-201ENST00000413752 448 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNA1P35221 USP12PX-201ENST00000432383 1057 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 RPL12P25-201ENST00000455592 494 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA1P35221 RPL26P9-201ENST00000457466 433 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNA1P35221 AC091153.1-201ENST00000466297 402 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AL160314.1-201ENST00000490836 438 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 RN7SKP157-201ENST00000516174 282 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 SCARNA1-201ENST00000517138 166 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA1P35221 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTNNA1P35221 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNA1P35221 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA1P35221 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AC024560.3-201ENST00000608482 349 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CTNNA1P35221 AC099506.2-201ENST00000623074 221 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AL356596.1-201ENST00000624230 379 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 ZNF833P-201ENST00000424938 1494 ntBASIC3.19□□□□□ -1.9
CTNNA1P35221 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNA1P35221 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNNA1P35221 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNNA1P35221 MTND5P33-201ENST00000571250 1450 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 MIR183-201ENST00000384958 110 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 CCNG1P1-201ENST00000406783 885 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 RNA5SP492-201ENST00000411330 114 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC005300.1-201ENST00000428401 373 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA1P35221 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA1P35221 FAM103A2P-201ENST00000444122 354 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.18□□□□□ -1.9
CTNNA1P35221 RPL36AP51-201ENST00000487216 318 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC091951.3-201ENST00000504093 246 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 LTV1P1-201ENST00000510683 1237 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 MTND5P13-201ENST00000513046 1079 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 RNA5SP290-201ENST00000517133 127 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AP000857.1-201ENST00000532151 543 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC068587.4-201ENST00000533893 186 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA1P35221 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA1P35221 DUXAP1-201ENST00000556632 463 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 MTND4P33-201ENST00000556706 766 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
CTNNA1P35221 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.18□□□□□ -1.9
CTNNA1P35221 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
CTNNA1P35221 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTNNA1P35221 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms