Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SHC1P29353 ZNF33BP1-201ENST00000452497 1834 ntBASIC3□□□□□ -1.93
SHC1P29353 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SHC1P29353 AF127577.6-201ENST00000623352 2191 ntBASIC3□□□□□ -1.93
SHC1P29353 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.99□□□□□ -1.93
SHC1P29353 AC017071.1-201ENST00000564407 2204 ntBASIC2.99□□□□□ -1.93
SHC1P29353 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHC1P29353 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
SHC1P29353 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 MIR208A-201ENST00000362287 71 ntBASIC2.99□□□□□ -1.93
SHC1P29353 RNU6-1283P-201ENST00000365314 105 ntBASIC2.99□□□□□ -1.93
SHC1P29353 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 AL031679.1-201ENST00000400616 525 ntBASIC2.99□□□□□ -1.93
SHC1P29353 RNA5SP44-201ENST00000410446 133 ntBASIC2.99□□□□□ -1.93
SHC1P29353 RPS3AP3-201ENST00000411933 242 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 AC007390.1-201ENST00000415722 356 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 EIF1P1-201ENST00000421436 341 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC012498.1-201ENST00000424037 437 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.99□□□□□ -1.93
SHC1P29353 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.99□□□□□ -1.93
SHC1P29353 RPL7P36-201ENST00000444633 681 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 MTND1P1-201ENST00000445453 368 ntBASIC2.99□□□□□ -1.93
SHC1P29353 PAXBP1P1-201ENST00000449315 447 ntBASIC2.99□□□□□ -1.93
SHC1P29353 GAPDHP17-201ENST00000449858 1001 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 FAM172BP-201ENST00000487497 1089 ntBASIC2.99□□□□□ -1.93
SHC1P29353 RNU6-506P-201ENST00000516553 94 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 AP003122.4-201ENST00000530980 758 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.99□□□□□ -1.93
SHC1P29353 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHC1P29353 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 RPL21P12-201ENST00000559810 515 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 AC107954.1-201ENST00000565906 727 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC137800.2-201ENST00000574375 120 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.99□□□□□ -1.93
SHC1P29353 SRGNP1-201ENST00000603392 451 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AL161729.4-201ENST00000604650 476 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC091965.4-201ENST00000607691 587 ntBASIC2.99□□□□□ -1.93
SHC1P29353 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.99□□□□□ -1.93
SHC1P29353 AC008250.2-201ENST00000615261 205 ntBASIC2.99□□□□□ -1.93
SHC1P29353 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.99□□□□□ -1.93
SHC1P29353 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.99□□□□□ -1.93
SHC1P29353 OR5H6-203ENST00000642105 978 ntBASIC2.99□□□□□ -1.93
SHC1P29353 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHC1P29353 AP001148.1-201ENST00000624124 2359 ntBASIC2.98□□□□□ -1.93
SHC1P29353 CCT4P2-201ENST00000233836 1548 ntBASIC2.98□□□□□ -1.93
SHC1P29353 ZNF734P-201ENST00000419494 1534 ntBASIC2.98□□□□□ -1.93
SHC1P29353 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SHC1P29353 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.98□□□□□ -1.93
SHC1P29353 RNU6-600P-201ENST00000362524 99 ntBASIC2.98□□□□□ -1.93
SHC1P29353 RNA5SP267-201ENST00000364893 126 ntBASIC2.98□□□□□ -1.93
SHC1P29353 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.98□□□□□ -1.93
SHC1P29353 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHC1P29353 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.98□□□□□ -1.93
SHC1P29353 Y_RNA.608-201ENST00000410647 95 ntBASIC2.98□□□□□ -1.93
SHC1P29353 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.98□□□□□ -1.93
SHC1P29353 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.98□□□□□ -1.93
SHC1P29353 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.98□□□□□ -1.93
SHC1P29353 MRPS10P2-201ENST00000431226 381 ntBASIC2.98□□□□□ -1.93
SHC1P29353 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.98□□□□□ -1.93
SHC1P29353 AP000542.1-201ENST00000448473 371 ntBASIC2.98□□□□□ -1.93
SHC1P29353 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.98□□□□□ -1.93
SHC1P29353 Z82190.1-201ENST00000454534 490 ntBASIC2.98□□□□□ -1.93
SHC1P29353 snoU109.1-201ENST00000459339 135 ntBASIC2.98□□□□□ -1.93
SHC1P29353 snoU13.3-201ENST00000459441 104 ntBASIC2.98□□□□□ -1.93
SHC1P29353 PABPC1P3-201ENST00000469174 459 ntBASIC2.98□□□□□ -1.93
SHC1P29353 AC126182.1-201ENST00000478134 357 ntBASIC2.98□□□□□ -1.93
SHC1P29353 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.98□□□□□ -1.93
SHC1P29353 AC004924.1-201ENST00000480160 781 ntBASIC2.98□□□□□ -1.93
SHC1P29353 RPL9P6-201ENST00000492764 598 ntBASIC2.98□□□□□ -1.93
SHC1P29353 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.98□□□□□ -1.93
SHC1P29353 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.98□□□□□ -1.93
SHC1P29353 AC091133.4-201ENST00000511142 308 ntBASIC2.98□□□□□ -1.93
SHC1P29353 AC024589.1-201ENST00000512207 263 ntBASIC2.98□□□□□ -1.93
SHC1P29353 APOOP4-201ENST00000513530 597 ntBASIC2.98□□□□□ -1.93
SHC1P29353 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms