Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR5697-201ENST00000578045 78 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH3P22223 MIR4276-201ENST00000584832 70 ntBASIC3.27□□□□□ -1.89
CDH3P22223 MIR548AB-201ENST00000584917 84 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC011451.2-201ENST00000604303 598 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AL158063.1-201ENST00000615349 536 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC027807.2-201ENST00000616099 408 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AP003122.6-201ENST00000623831 495 ntBASIC3.27□□□□□ -1.89
CDH3P22223 AC079597.1-201ENST00000624306 508 ntBASIC3.27□□□□□ -1.89
CDH3P22223 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH3P22223 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
CDH3P22223 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CDH3P22223 API5P2-201ENST00000397055 1498 ntBASIC3.27□□□□□ -1.89
CDH3P22223 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CDH3P22223 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH3P22223 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH3P22223 MTND4P4-201ENST00000439033 1366 ntBASIC3.26□□□□□ -1.89
CDH3P22223 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH3P22223 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH3P22223 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH3P22223 Y_RNA.77-201ENST00000362962 107 ntBASIC3.26□□□□□ -1.89
CDH3P22223 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
CDH3P22223 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
CDH3P22223 U3.20-201ENST00000390909 217 ntBASIC3.26□□□□□ -1.89
CDH3P22223 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH3P22223 AL359704.1-201ENST00000411586 781 ntBASIC3.26□□□□□ -1.89
CDH3P22223 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 Z99755.1-201ENST00000414048 380 ntBASIC3.26□□□□□ -1.89
CDH3P22223 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH3P22223 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH3P22223 THAP5P1-201ENST00000439089 262 ntBASIC3.26□□□□□ -1.89
CDH3P22223 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH3P22223 AC009961.3-201ENST00000449832 765 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC007967.1-201ENST00000455422 1159 ntBASIC3.26□□□□□ -1.89
CDH3P22223 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH3P22223 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH3P22223 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH3P22223 AP006245.1-201ENST00000522549 120 ntBASIC3.26□□□□□ -1.89
CDH3P22223 ERHP1-201ENST00000523006 310 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH3P22223 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 COX6CP3-201ENST00000580869 223 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC083760.1-201ENST00000589621 670 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH3P22223 TUG1_1.1-201ENST00000610654 145 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC009090.3-201ENST00000616553 565 ntBASIC3.26□□□□□ -1.89
CDH3P22223 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CDH3P22223 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC012150.2-201ENST00000621300 544 ntBASIC3.26□□□□□ -1.89
CDH3P22223 AC009902.3-201ENST00000606235 2172 ntBASIC3.26□□□□□ -1.89
CDH3P22223 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH3P22223 AC073346.2-201ENST00000624724 2058 ntBASIC3.26□□□□□ -1.89
CDH3P22223 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH3P22223 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
CDH3P22223 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH3P22223 AC092125.1-201ENST00000562568 1995 ntBASIC3.25□□□□□ -1.89
CDH3P22223 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
CDH3P22223 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH3P22223 RNU5F-7P-201ENST00000363696 115 ntBASIC3.25□□□□□ -1.89
CDH3P22223 RPL17P12-201ENST00000413391 526 ntBASIC3.25□□□□□ -1.89
CDH3P22223 SEPT2P1-201ENST00000419651 180 ntBASIC3.25□□□□□ -1.89
CDH3P22223 DUTP6-201ENST00000425573 462 ntBASIC3.25□□□□□ -1.89
CDH3P22223 OR4K11P-201ENST00000431829 904 ntBASIC3.25□□□□□ -1.89
CDH3P22223 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH3P22223 MTCO2P16-201ENST00000436962 677 ntBASIC3.25□□□□□ -1.89
CDH3P22223 RPS3AP12-201ENST00000443616 753 ntBASIC3.25□□□□□ -1.89
CDH3P22223 SNRPGP9-201ENST00000456025 225 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AC104472.2-201ENST00000469035 601 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH3P22223 RPL7P23-201ENST00000493874 747 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH3P22223 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH3P22223 AF131216.2-201ENST00000512316 564 ntBASIC3.25□□□□□ -1.89
CDH3P22223 MTND5P13-201ENST00000513046 1079 ntBASIC3.25□□□□□ -1.89
CDH3P22223 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
CDH3P22223 RNU6-1003P-201ENST00000517099 105 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH3P22223 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH3P22223 AC060771.1-201ENST00000582031 164 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AP001429.1-201ENST00000602568 530 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AL162713.1-201ENST00000604480 262 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AC245008.1-201ENST00000608123 476 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AC239868.4-201ENST00000608318 671 ntBASIC3.25□□□□□ -1.89
CDH3P22223 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH3P22223 AC095031.1-201ENST00000623685 672 ntBASIC3.25□□□□□ -1.89
CDH3P22223 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
CDH3P22223 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH3P22223 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH3P22223 AC011460.1-201ENST00000636268 1834 ntBASIC3.24□□□□□ -1.89
CDH3P22223 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH3P22223 Y_RNA.46-201ENST00000362695 102 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RNU5E-5P-201ENST00000365379 116 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RNU6-533P-201ENST00000384144 107 ntBASIC3.24□□□□□ -1.89
CDH3P22223 RNU6-882P-201ENST00000391025 103 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms