Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AP001429.1-201ENST00000602568 530 ntBASIC2.05□□□□□ -2.08
ATF1P18846 AL033523.1-201ENST00000605153 153 ntBASIC2.05□□□□□ -2.08
ATF1P18846 SCARNA17.4-201ENST00000614296 143 ntBASIC2.05□□□□□ -2.08
ATF1P18846 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.05□□□□□ -2.08
ATF1P18846 MIR6130-201ENST00000619419 109 ntBASIC2.05□□□□□ -2.08
ATF1P18846 AC006386.2-201ENST00000624491 75 ntBASIC2.05□□□□□ -2.08
ATF1P18846 AC012005.1-201ENST00000624575 75 ntBASIC2.05□□□□□ -2.08
ATF1P18846 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.05□□□□□ -2.08
ATF1P18846 MIR1291-201ENST00000627649 87 ntBASIC2.05□□□□□ -2.08
ATF1P18846 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.05□□□□□ -2.08
ATF1P18846 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.05□□□□□ -2.08
ATF1P18846 AL359693.1-201ENST00000614959 2407 ntBASIC2.05□□□□□ -2.08
ATF1P18846 AL139276.1-201ENST00000311910 1001 ntBASIC2.04□□□□□ -2.08
ATF1P18846 SNRPEP3-201ENST00000338402 276 ntBASIC2.04□□□□□ -2.08
ATF1P18846 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ATF1P18846 RNU5B-1-201ENST00000363286 116 ntBASIC2.04□□□□□ -2.08
ATF1P18846 OR5H15-201ENST00000383696 930 ntBASIC2.04□□□□□ -2.08
ATF1P18846 DHFRP6-201ENST00000401776 268 ntBASIC2.04□□□□□ -2.08
ATF1P18846 RNA5SP184-201ENST00000411071 108 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC007064.1-201ENST00000412238 351 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.04□□□□□ -2.08
ATF1P18846 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 PPP1R11P2-201ENST00000423543 382 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AL590383.1-201ENST00000428602 75 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 AL049734.2-201ENST00000441066 616 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
ATF1P18846 GTF2IP9-201ENST00000502460 301 ntBASIC2.04□□□□□ -2.08
ATF1P18846 GZMAP1-201ENST00000503054 631 ntBASIC2.04□□□□□ -2.08
ATF1P18846 TMEM251P1-201ENST00000503717 318 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC022447.3-201ENST00000506865 495 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC026436.1-201ENST00000510537 270 ntBASIC2.04□□□□□ -2.08
ATF1P18846 RNU6-1261P-201ENST00000517194 104 ntBASIC2.04□□□□□ -2.08
ATF1P18846 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.04□□□□□ -2.08
ATF1P18846 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ATF1P18846 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
ATF1P18846 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.04□□□□□ -2.08
ATF1P18846 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 AL132857.1-201ENST00000555180 708 ntBASIC2.04□□□□□ -2.08
ATF1P18846 CKAP2P1-201ENST00000555477 2049 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 AC025281.1-201ENST00000567026 265 ntBASIC2.04□□□□□ -2.08
ATF1P18846 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.04□□□□□ -2.08
ATF1P18846 MIR4319-201ENST00000577285 85 ntBASIC2.04□□□□□ -2.08
ATF1P18846 LARP7P3-201ENST00000579888 337 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
ATF1P18846 MIR7106-201ENST00000612419 65 ntBASIC2.04□□□□□ -2.08
ATF1P18846 MIR6895-201ENST00000613497 78 ntBASIC2.04□□□□□ -2.08
ATF1P18846 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.04□□□□□ -2.08
ATF1P18846 AC010975.3-201ENST00000618727 978 ntBASIC2.04□□□□□ -2.08
ATF1P18846 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
ATF1P18846 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ATF1P18846 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ATF1P18846 AC062016.1-201ENST00000355719 319 ntBASIC2.03□□□□□ -2.08
ATF1P18846 RNU6-207P-201ENST00000384137 107 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.03□□□□□ -2.08
ATF1P18846 MTCO2P1-201ENST00000424648 477 ntBASIC2.03□□□□□ -2.08
ATF1P18846 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 MTCO3P30-201ENST00000426425 670 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC006946.1-201ENST00000429106 328 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC093155.1-201ENST00000440164 826 ntBASIC2.03□□□□□ -2.08
ATF1P18846 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.03□□□□□ -2.08
ATF1P18846 AL031659.1-201ENST00000447075 539 ntBASIC2.03□□□□□ -2.08
ATF1P18846 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 OFD1P3Y-201ENST00000453312 783 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.03□□□□□ -2.08
ATF1P18846 AC233279.1-201ENST00000455300 423 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.03□□□□□ -2.08
ATF1P18846 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.03□□□□□ -2.08
ATF1P18846 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.03□□□□□ -2.08
ATF1P18846 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.03□□□□□ -2.08
ATF1P18846 AC103783.1-201ENST00000520506 373 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.03□□□□□ -2.08
ATF1P18846 UBTFL10-201ENST00000528532 562 ntBASIC2.03□□□□□ -2.08
ATF1P18846 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.03□□□□□ -2.08
ATF1P18846 AC087465.1-201ENST00000560574 245 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC007621.1-201ENST00000604544 437 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC005000.2-201ENST00000605468 310 ntBASIC2.03□□□□□ -2.08
ATF1P18846 OR10AB1P-201ENST00000609613 938 ntBASIC2.03□□□□□ -2.08
ATF1P18846 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AC068057.2-201ENST00000624047 895 ntBASIC2.03□□□□□ -2.08
ATF1P18846 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.03□□□□□ -2.08
ATF1P18846 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
ATF1P18846 Z82209.1-201ENST00000422141 2135 ntBASIC2.03□□□□□ -2.08
ATF1P18846 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ATF1P18846 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
ATF1P18846 AC097714.1-201ENST00000511272 1647 ntBASIC2.02□□□□□ -2.09
ATF1P18846 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.02□□□□□ -2.09
ATF1P18846 AC005832.2-201ENST00000538921 1430 ntBASIC2.02□□□□□ -2.09
ATF1P18846 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
ATF1P18846 RNA5SP68-201ENST00000363885 119 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms