Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 APOOP3-201ENST00000536787 586 ntBASIC1.25□□□□□ -2.21
VCANP13611 AC087468.1-201ENST00000604365 630 ntBASIC1.25□□□□□ -2.21
VCANP13611 AC011477.1-204ENST00000623416 1325 ntBASIC1.24□□□□□ -2.21
VCANP13611 CR848007.2-201ENST00000424918 787 ntBASIC1.24□□□□□ -2.21
VCANP13611 AC234064.1-201ENST00000436312 247 ntBASIC1.24□□□□□ -2.21
VCANP13611 RSL24D1P2-201ENST00000445584 366 ntBASIC1.24□□□□□ -2.21
VCANP13611 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCANP13611 BOLA3P3-201ENST00000505182 232 ntBASIC1.24□□□□□ -2.21
VCANP13611 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.24□□□□□ -2.21
VCANP13611 GLUD1P4-201ENST00000590914 418 ntBASIC1.24□□□□□ -2.21
VCANP13611 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.24□□□□□ -2.21
VCANP13611 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
VCANP13611 RNU6-249P-201ENST00000363016 102 ntBASIC1.24□□□□□ -2.21
VCANP13611 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCANP13611 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCANP13611 RNA5SP489-201ENST00000410986 109 ntBASIC1.24□□□□□ -2.21
VCANP13611 FCF1P2-201ENST00000415284 583 ntBASIC1.24□□□□□ -2.21
VCANP13611 IPO7P1-201ENST00000442031 636 ntBASIC1.24□□□□□ -2.21
VCANP13611 AC008427.1-201ENST00000503102 655 ntBASIC1.24□□□□□ -2.21
VCANP13611 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.24□□□□□ -2.21
VCANP13611 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.24□□□□□ -2.21
VCANP13611 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
VCANP13611 AC098799.2-201ENST00000509466 868 ntBASIC1.24□□□□□ -2.21
VCANP13611 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.24□□□□□ -2.21
VCANP13611 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
VCANP13611 RNU6-222P-201ENST00000362438 107 ntBASIC1.23□□□□□ -2.21
VCANP13611 RNY4P3-201ENST00000365254 95 ntBASIC1.23□□□□□ -2.21
VCANP13611 AC017078.1-201ENST00000416146 368 ntBASIC1.23□□□□□ -2.21
VCANP13611 AC008850.1-201ENST00000427546 362 ntBASIC1.23□□□□□ -2.21
VCANP13611 ARF4P2-201ENST00000430209 526 ntBASIC1.23□□□□□ -2.21
VCANP13611 AL591212.2-201ENST00000433923 257 ntBASIC1.23□□□□□ -2.21
VCANP13611 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
VCANP13611 AC091488.1-201ENST00000604239 660 ntBASIC1.23□□□□□ -2.21
VCANP13611 AC211469.2-201ENST00000605461 205 ntBASIC1.23□□□□□ -2.21
VCANP13611 AL159169.2-201ENST00000610061 1269 ntBASIC1.23□□□□□ -2.21
VCANP13611 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
VCANP13611 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.23□□□□□ -2.21
VCANP13611 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.22□□□□□ -2.21
VCANP13611 AC009127.3-201ENST00000570531 403 ntBASIC1.22□□□□□ -2.21
VCANP13611 AC090517.3-201ENST00000625170 141 ntBASIC1.22□□□□□ -2.21
VCANP13611 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VCANP13611 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VCANP13611 Y_RNA.675-201ENST00000516389 149 ntBASIC1.22□□□□□ -2.21
VCANP13611 CYCSP23-201ENST00000519781 313 ntBASIC1.22□□□□□ -2.21
VCANP13611 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.22□□□□□ -2.21
VCANP13611 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
VCANP13611 Y_RNA.412-201ENST00000384001 104 ntBASIC1.22□□□□□ -2.21
VCANP13611 SNRPEP10-201ENST00000420249 274 ntBASIC1.22□□□□□ -2.21
VCANP13611 RPS6P12-201ENST00000432491 726 ntBASIC1.22□□□□□ -2.21
VCANP13611 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.22□□□□□ -2.21
VCANP13611 AC096571.1-202ENST00000506634 735 ntBASIC1.22□□□□□ -2.21
VCANP13611 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.22□□□□□ -2.21
VCANP13611 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.22□□□□□ -2.21
VCANP13611 AC107015.1-201ENST00000466902 747 ntBASIC1.21□□□□□ -2.22
VCANP13611 AC104229.1-201ENST00000561364 255 ntBASIC1.21□□□□□ -2.22
VCANP13611 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.21□□□□□ -2.22
VCANP13611 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
VCANP13611 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VCANP13611 HMGN2P35-201ENST00000412164 270 ntBASIC1.21□□□□□ -2.22
VCANP13611 ARL5AP2-201ENST00000444698 533 ntBASIC1.21□□□□□ -2.22
VCANP13611 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.21□□□□□ -2.22
VCANP13611 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
VCANP13611 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.21□□□□□ -2.22
VCANP13611 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
VCANP13611 SSXP10-201ENST00000402595 565 ntBASIC1.21□□□□□ -2.22
VCANP13611 TXNP7-201ENST00000406296 293 ntBASIC1.21□□□□□ -2.22
VCANP13611 AC073264.1-201ENST00000411508 416 ntBASIC1.21□□□□□ -2.22
VCANP13611 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.21□□□□□ -2.22
VCANP13611 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.21□□□□□ -2.22
VCANP13611 MIR4711-201ENST00000578274 70 ntBASIC1.21□□□□□ -2.22
VCANP13611 AL512605.2-201ENST00000592972 256 ntBASIC1.21□□□□□ -2.22
VCANP13611 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.21□□□□□ -2.22
VCANP13611 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.21□□□□□ -2.22
VCANP13611 AC012078.1-201ENST00000405035 1646 ntBASIC1.2□□□□□ -2.22
VCANP13611 AC233728.2-201ENST00000425348 757 ntBASIC1.2□□□□□ -2.22
VCANP13611 AC006270.2-201ENST00000578523 652 ntBASIC1.2□□□□□ -2.22
VCANP13611 AC006270.3-201ENST00000605967 1036 ntBASIC1.2□□□□□ -2.22
VCANP13611 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
VCANP13611 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VCANP13611 AC068700.1-201ENST00000565862 3754 ntBASIC1.2□□□□□ -2.22
VCANP13611 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
VCANP13611 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
VCANP13611 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.2□□□□□ -2.22
VCANP13611 AL162388.1-201ENST00000450912 352 ntBASIC1.2□□□□□ -2.22
VCANP13611 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.2□□□□□ -2.22
VCANP13611 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
VCANP13611 MIR409-201ENST00000362237 79 ntBASIC1.19□□□□□ -2.22
VCANP13611 Y_RNA.324-201ENST00000365165 102 ntBASIC1.19□□□□□ -2.22
VCANP13611 RPL7P34-201ENST00000433316 712 ntBASIC1.19□□□□□ -2.22
VCANP13611 AC016691.1-201ENST00000441321 413 ntBASIC1.19□□□□□ -2.22
VCANP13611 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.19□□□□□ -2.22
VCANP13611 AP004607.1-201ENST00000524456 203 ntBASIC1.19□□□□□ -2.22
VCANP13611 AC074029.2-201ENST00000551045 634 ntBASIC1.19□□□□□ -2.22
VCANP13611 AC011890.2-201ENST00000613393 294 ntBASIC1.19□□□□□ -2.22
VCANP13611 AP000648.3-201ENST00000623539 4507 ntBASIC1.19□□□□□ -2.22
VCANP13611 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.19□□□□□ -2.22
VCANP13611 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VCANP13611 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
VCANP13611 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.19□□□□□ -2.22
VCANP13611 AC073901.1-201ENST00000462471 408 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms