Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SPA17P1-201ENST00000416656 452 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 TRIAP1P1-201ENST00000427062 225 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 RPL35AP22-201ENST00000436855 335 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 RNU6-420P-201ENST00000458780 107 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 SETP11-201ENST00000473027 690 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC006483.1-201ENST00000487308 313 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC106872.3-201ENST00000495104 446 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 SLC25A15P5-201ENST00000508033 253 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 RNU6-928P-201ENST00000516876 104 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 OR4H12P-201ENST00000556269 907 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 HMGB1P14-201ENST00000557424 591 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 MIR5195-201ENST00000583555 115 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 ZNF861P-201ENST00000588126 639 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 NUTF2P8-201ENST00000604593 363 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AL139344.1-201ENST00000605228 195 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC107952.2-201ENST00000606048 486 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 TUSC7.1-201ENST00000610969 165 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 Z99129.2-201ENST00000619967 314 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 AC010338.1-201ENST00000621823 717 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 ASNSP3-201ENST00000451989 1306 ntBASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.32□□□□□ -2.04
IGHV3-43DP0DP04 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AL590084.2-201ENST00000401481 382 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 UBE2FP1-201ENST00000416536 447 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AL035407.1-201ENST00000429211 571 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 TPT1P14-201ENST00000448018 505 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AL109741.2-201ENST00000455561 343 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 ATG12P2-201ENST00000456830 416 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 snoU13.28-201ENST00000459235 104 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AL135752.1-201ENST00000479477 471 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC135721.1-201ENST00000497954 479 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC083906.5-201ENST00000503722 328 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 SNORA74D-201ENST00000516404 141 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC023050.2-201ENST00000544968 387 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC136618.2-201ENST00000575091 400 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 TPMTP1-201ENST00000592307 737 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 VN1R92P-201ENST00000598511 928 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 BNIP3P23-201ENST00000599655 511 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC097468.3-201ENST00000607956 456 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC024560.3-201ENST00000608482 349 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC107871.2-201ENST00000612894 502 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 TUG1_2.1-201ENST00000614234 87 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC013476.2-201ENST00000614456 459 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AL607023.1-201ENST00000620045 248 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC084035.1-201ENST00000634543 607 ntBASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
IGHV3-43DP0DP04 AC007785.2-201ENST00000598627 1916 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 RNU6-433P-201ENST00000363216 104 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 RNA5SP88-201ENST00000365560 109 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 SNORA18.3-201ENST00000384122 132 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 AL512633.1-201ENST00000399931 655 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 AL359704.1-201ENST00000411586 781 ntBASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.3□□□□□ -2.04
IGHV3-43DP0DP04 AL022400.1-201ENST00000423946 935 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms