Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
UBCP0CG48 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.34□□□□□ -2.03
UBCP0CG48 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.34□□□□□ -2.03
UBCP0CG48 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.34□□□□□ -2.03
UBCP0CG48 AC126365.2-201ENST00000580630 379 ntBASIC2.34□□□□□ -2.03
UBCP0CG48 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
UBCP0CG48 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.34□□□□□ -2.03
UBCP0CG48 OR8B1P-202ENST00000641132 1178 ntBASIC2.34□□□□□ -2.03
UBCP0CG48 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.34□□□□□ -2.03
UBCP0CG48 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
UBCP0CG48 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
UBCP0CG48 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
UBCP0CG48 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.33□□□□□ -2.04
UBCP0CG48 PABPC1P9-201ENST00000426076 1612 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UBCP0CG48 RNA5SP21-201ENST00000410917 96 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 RPL35AP12-201ENST00000425362 338 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AL139132.1-201ENST00000431587 344 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
UBCP0CG48 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 NANOGNBP1-201ENST00000448444 480 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 AC233279.1-201ENST00000455300 423 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 ATG12P2-201ENST00000456830 416 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.33□□□□□ -2.04
UBCP0CG48 RPS29P26-201ENST00000477483 171 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC092902.1-201ENST00000486999 259 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 SRIP1-201ENST00000489235 288 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 EIF4EP3-201ENST00000498782 656 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC008427.1-201ENST00000503102 655 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.33□□□□□ -2.04
UBCP0CG48 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 RNA5SP341-201ENST00000516261 117 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 OR4R1P-201ENST00000529879 463 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.33□□□□□ -2.04
UBCP0CG48 AC007954.1-201ENST00000554198 494 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.33□□□□□ -2.04
UBCP0CG48 AC005951.2-201ENST00000576282 495 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 MIR4429-201ENST00000580105 73 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AL049779.4-201ENST00000604500 156 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AL161756.2-201ENST00000604597 246 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC008498.1-201ENST00000613012 531 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.33□□□□□ -2.04
UBCP0CG48 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.33□□□□□ -2.04
UBCP0CG48 MTND1P37-201ENST00000636562 264 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 MIR7515-201ENST00000637837 67 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 AL359693.1-201ENST00000614959 2407 ntBASIC2.33□□□□□ -2.04
UBCP0CG48 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
UBCP0CG48 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBCP0CG48 RNU6-140P-201ENST00000384566 108 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 RNU6-952P-201ENST00000391164 108 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AL138827.1-201ENST00000402666 306 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 HMGB1P49-201ENST00000418882 569 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 PTP4A1P7-201ENST00000423476 514 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.32□□□□□ -2.04
UBCP0CG48 AC007919.1-201ENST00000429380 217 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC104389.3-201ENST00000445629 235 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AL671855.1-201ENST00000446875 1203 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.32□□□□□ -2.04
UBCP0CG48 BX322784.1-201ENST00000455793 1077 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC097493.1-201ENST00000463958 372 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 NRON-201ENST00000517270 370 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.32□□□□□ -2.04
UBCP0CG48 AL353997.4-201ENST00000586196 166 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 TPMTP1-201ENST00000592307 737 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 BBIP1P1-201ENST00000602999 279 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 SRGNP1-201ENST00000603392 451 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AL356280.1-201ENST00000603614 379 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC135507.1-201ENST00000607214 561 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC093673.2-201ENST00000609674 331 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 AC009237.15-201ENST00000610252 501 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 FTX_3.1-201ENST00000610451 147 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 ATP5A1P2-202ENST00000616464 443 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 MIR8057-201ENST00000620957 69 ntBASIC2.32□□□□□ -2.04
UBCP0CG48 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
UBCP0CG48 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
UBCP0CG48 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
UBCP0CG48 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
UBCP0CG48 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBCP0CG48 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBCP0CG48 DDX10P1-201ENST00000448545 1933 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 AL161781.1-201ENST00000354277 403 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 FTLP6-201ENST00000355274 422 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 SNORA23-201ENST00000365128 182 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 Y_RNA.408-201ENST00000383987 102 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 RNU6-224P-201ENST00000384055 107 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.31□□□□□ -2.04
UBCP0CG48 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms