Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 OR5H15-201ENST00000383696 930 ntBASIC2.48□□□□□ -2.01
TPM1P09493 RNU6-549P-201ENST00000384433 107 ntBASIC2.48□□□□□ -2.01
TPM1P09493 MIR217-201ENST00000384817 110 ntBASIC2.48□□□□□ -2.01
TPM1P09493 RNU6-920P-201ENST00000410926 92 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.48□□□□□ -2.01
TPM1P09493 TAF13P2-201ENST00000416876 286 ntBASIC2.48□□□□□ -2.01
TPM1P09493 COTL1P1-201ENST00000422309 375 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AC092047.1-201ENST00000424997 240 ntBASIC2.48□□□□□ -2.01
TPM1P09493 USP12PX-201ENST00000432383 1057 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.48□□□□□ -2.01
TPM1P09493 Z80107.1-201ENST00000436830 412 ntBASIC2.48□□□□□ -2.01
TPM1P09493 BNIP3P2-201ENST00000441221 577 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AC004263.1-201ENST00000479327 332 ntBASIC2.48□□□□□ -2.01
TPM1P09493 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.48□□□□□ -2.01
TPM1P09493 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
TPM1P09493 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
TPM1P09493 UBTFL10-201ENST00000528532 562 ntBASIC2.48□□□□□ -2.01
TPM1P09493 NDUFS5P6-201ENST00000529136 295 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.48□□□□□ -2.01
TPM1P09493 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.48□□□□□ -2.01
TPM1P09493 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.48□□□□□ -2.01
TPM1P09493 AGGF1P5-201ENST00000567900 919 ntBASIC2.48□□□□□ -2.01
TPM1P09493 MIR5007-201ENST00000583098 95 ntBASIC2.48□□□□□ -2.01
TPM1P09493 HMGN2P15-201ENST00000585707 270 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AC012468.1-201ENST00000604888 430 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AL449363.1-201ENST00000617815 186 ntBASIC2.48□□□□□ -2.01
TPM1P09493 AC004009.2-201ENST00000623016 728 ntBASIC2.48□□□□□ -2.01
TPM1P09493 U6.101-201ENST00000637707 76 ntBASIC2.48□□□□□ -2.01
TPM1P09493 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.48□□□□□ -2.01
TPM1P09493 AP000553.5-201ENST00000641933 54 ntBASIC2.48□□□□□ -2.01
TPM1P09493 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TPM1P09493 DDX10P1-201ENST00000448545 1933 ntBASIC2.48□□□□□ -2.01
TPM1P09493 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 AC097714.1-201ENST00000511272 1647 ntBASIC2.47□□□□□ -2.01
TPM1P09493 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM1P09493 OR5T3-201ENST00000303059 1023 ntBASIC2.47□□□□□ -2.01
TPM1P09493 SNORA6-201ENST00000384033 151 ntBASIC2.47□□□□□ -2.01
TPM1P09493 HMGB1P17-201ENST00000403495 628 ntBASIC2.47□□□□□ -2.01
TPM1P09493 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.47□□□□□ -2.01
TPM1P09493 AL121882.1-201ENST00000422893 417 ntBASIC2.47□□□□□ -2.01
TPM1P09493 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TPM1P09493 SRIP2-201ENST00000428470 166 ntBASIC2.47□□□□□ -2.01
TPM1P09493 MTND2P5-201ENST00000432656 1006 ntBASIC2.47□□□□□ -2.01
TPM1P09493 PIGFP3-201ENST00000441918 722 ntBASIC2.47□□□□□ -2.01
TPM1P09493 IPO7P1-201ENST00000442031 636 ntBASIC2.47□□□□□ -2.01
TPM1P09493 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM1P09493 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TPM1P09493 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM1P09493 AC108734.3-201ENST00000481241 1165 ntBASIC2.47□□□□□ -2.01
TPM1P09493 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 AC135628.1-201ENST00000568867 534 ntBASIC2.47□□□□□ -2.01
TPM1P09493 MIR4666A-201ENST00000580160 79 ntBASIC2.47□□□□□ -2.01
TPM1P09493 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.47□□□□□ -2.01
TPM1P09493 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.47□□□□□ -2.01
TPM1P09493 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM1P09493 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.47□□□□□ -2.01
TPM1P09493 AC068313.1-201ENST00000604028 1008 ntBASIC2.47□□□□□ -2.01
TPM1P09493 AP003973.1-201ENST00000604639 691 ntBASIC2.47□□□□□ -2.01
TPM1P09493 SNORD14A-201ENST00000606526 91 ntBASIC2.47□□□□□ -2.01
TPM1P09493 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.47□□□□□ -2.01
TPM1P09493 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
TPM1P09493 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.47□□□□□ -2.01
TPM1P09493 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
TPM1P09493 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 HSPE1P11-201ENST00000339579 310 ntBASIC2.46□□□□□ -2.02
TPM1P09493 RNU6-492P-201ENST00000363035 104 ntBASIC2.46□□□□□ -2.02
TPM1P09493 RNU6-217P-201ENST00000384164 104 ntBASIC2.46□□□□□ -2.02
TPM1P09493 SNORA36C-201ENST00000384289 132 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM1P09493 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM1P09493 Z93242.1-201ENST00000427102 353 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM1P09493 ARF4P4-201ENST00000439608 520 ntBASIC2.46□□□□□ -2.02
TPM1P09493 Z82210.1-201ENST00000440037 231 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM1P09493 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.46□□□□□ -2.02
TPM1P09493 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM1P09493 ANKRD26P4-201ENST00000455755 950 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AP1S2P1-201ENST00000457344 379 ntBASIC2.46□□□□□ -2.02
TPM1P09493 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM1P09493 RNU1-40P-201ENST00000516816 164 ntBASIC2.46□□□□□ -2.02
TPM1P09493 RNU1-97P-201ENST00000516872 164 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AC027309.2-201ENST00000520566 192 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AC025755.1-201ENST00000521306 278 ntBASIC2.46□□□□□ -2.02
TPM1P09493 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TPM1P09493 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.46□□□□□ -2.02
TPM1P09493 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM1P09493 OR4K7P-201ENST00000580232 945 ntBASIC2.46□□□□□ -2.02
TPM1P09493 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.46□□□□□ -2.02
TPM1P09493 MIR92B-201ENST00000607575 96 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms