Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 AC006378.2-201ENST00000623178 2476 ntBASIC2.94□□□□□ -1.94
MT-ND1P03886 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
MT-ND1P03886 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.93□□□□□ -1.94
MT-ND1P03886 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MT-ND1P03886 RNU6-799P-201ENST00000363567 107 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 RNA5SP50-201ENST00000363731 107 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 CD24P4-201ENST00000382840 243 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 RNU6-1207P-201ENST00000384343 107 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 RNA5SP252-201ENST00000391131 119 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 RNU6-1197P-201ENST00000391183 107 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 MIR1305-201ENST00000408300 86 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 MTCO1P17-201ENST00000411522 491 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC244035.1-201ENST00000430042 390 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC091286.1-201ENST00000431233 461 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 HMGN2P31-201ENST00000432430 273 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC129850.1-201ENST00000436203 508 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AL831737.1-201ENST00000441288 271 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 COX6CP12-201ENST00000446748 202 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AP000936.2-201ENST00000447151 681 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 RPL31P60-201ENST00000478450 367 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC106872.3-201ENST00000495104 446 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC023632.4-201ENST00000517783 191 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MT-ND1P03886 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AP003497.1-201ENST00000528472 562 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 HIGD1AP1-201ENST00000550979 275 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 OR4H12P-201ENST00000556269 907 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.93□□□□□ -1.94
MT-ND1P03886 MIR2682-201ENST00000580305 110 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC012065.4-201ENST00000602445 679 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AL590229.1-201ENST00000603497 542 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 HSPE1P7-201ENST00000604681 321 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC135507.1-201ENST00000607214 561 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC092354.2-201ENST00000607786 514 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.93□□□□□ -1.94
MT-ND1P03886 AC009090.3-201ENST00000616553 565 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC027309.3-201ENST00000623419 351 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
MT-ND1P03886 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.93□□□□□ -1.94
MT-ND1P03886 TPTE2P4-201ENST00000258589 1605 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AC005832.2-201ENST00000538921 1430 ntBASIC2.93□□□□□ -1.94
MT-ND1P03886 AL353743.1-202ENST00000431724 1695 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AL161781.1-201ENST00000354277 403 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 U3.4-201ENST00000363352 213 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 RNU6-1027P-201ENST00000383998 107 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 U8.14-201ENST00000390843 143 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AC025750.1-201ENST00000399891 379 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AL356421.1-201ENST00000403255 413 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 RPS3AP24-201ENST00000407896 734 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AC016907.1-201ENST00000419483 435 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 RPS27AP14-201ENST00000422868 454 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.92□□□□□ -1.94
MT-ND1P03886 MTCO2P16-201ENST00000436962 677 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 RPL26P6-201ENST00000440913 438 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.92□□□□□ -1.94
MT-ND1P03886 RPL21P41-201ENST00000459863 264 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AC104563.1-201ENST00000476147 376 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC109464.2-201ENST00000510242 943 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC068587.4-201ENST00000533893 186 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.92□□□□□ -1.94
MT-ND1P03886 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC007458.1-201ENST00000542812 373 ntBASIC2.92□□□□□ -1.94
MT-ND1P03886 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.92□□□□□ -1.94
MT-ND1P03886 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms