Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SNORA51.6-201ENST00000384151 125 ntBASIC2.21□□□□□ -2.06
APOEP02649 AL355615.1-201ENST00000406187 641 ntBASIC2.21□□□□□ -2.06
APOEP02649 RN7SKP32-201ENST00000410167 303 ntBASIC2.21□□□□□ -2.06
APOEP02649 RNU2-47P-201ENST00000410649 186 ntBASIC2.21□□□□□ -2.06
APOEP02649 RNU2-15P-201ENST00000410692 191 ntBASIC2.21□□□□□ -2.06
APOEP02649 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.21□□□□□ -2.06
APOEP02649 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.21□□□□□ -2.06
APOEP02649 RPS15AP27-201ENST00000449183 343 ntBASIC2.21□□□□□ -2.06
APOEP02649 AC087588.1-201ENST00000462203 316 ntBASIC2.21□□□□□ -2.06
APOEP02649 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.21□□□□□ -2.06
APOEP02649 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOEP02649 MTCYBP17-201ENST00000503579 789 ntBASIC2.21□□□□□ -2.06
APOEP02649 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOEP02649 AL359273.1-201ENST00000510918 627 ntBASIC2.21□□□□□ -2.06
APOEP02649 COX6CP5-201ENST00000527162 228 ntBASIC2.21□□□□□ -2.06
APOEP02649 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.21□□□□□ -2.06
APOEP02649 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.21□□□□□ -2.06
APOEP02649 AL138976.2-201ENST00000563989 694 ntBASIC2.21□□□□□ -2.06
APOEP02649 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
APOEP02649 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
APOEP02649 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
APOEP02649 AP005137.2-201ENST00000609238 400 ntBASIC2.21□□□□□ -2.06
APOEP02649 AC079395.3-201ENST00000615161 484 ntBASIC2.21□□□□□ -2.06
APOEP02649 AL136981.2-201ENST00000617319 734 ntBASIC2.21□□□□□ -2.06
APOEP02649 AC010378.1-201ENST00000619270 362 ntBASIC2.21□□□□□ -2.06
APOEP02649 AL356585.4-201ENST00000623078 1229 ntBASIC2.21□□□□□ -2.06
APOEP02649 AC090772.4-201ENST00000623599 362 ntBASIC2.21□□□□□ -2.06
APOEP02649 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.21□□□□□ -2.06
APOEP02649 AL359851.1-201ENST00000569460 4997 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC022336.2-201ENST00000568966 2538 ntBASIC2.2□□□□□ -2.06
APOEP02649 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOEP02649 AC104454.1-201ENST00000421341 1401 ntBASIC2.2□□□□□ -2.06
APOEP02649 DEFB108F-201ENST00000344638 222 ntBASIC2.2□□□□□ -2.06
APOEP02649 RNU6-253P-201ENST00000384730 105 ntBASIC2.2□□□□□ -2.06
APOEP02649 MIR135A2-201ENST00000384854 100 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC016769.3-201ENST00000396562 315 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.2□□□□□ -2.06
APOEP02649 OOSP1P1-201ENST00000423265 274 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC005345.1-201ENST00000431868 217 ntBASIC2.2□□□□□ -2.06
APOEP02649 UBE2FP3-201ENST00000436366 524 ntBASIC2.2□□□□□ -2.06
APOEP02649 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.2□□□□□ -2.06
APOEP02649 SDR42E1P3-201ENST00000438345 502 ntBASIC2.2□□□□□ -2.06
APOEP02649 AL592447.1-201ENST00000447592 540 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC109486.1-201ENST00000486833 374 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.2□□□□□ -2.06
APOEP02649 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOEP02649 DEFB108D-201ENST00000527787 222 ntBASIC2.2□□□□□ -2.06
APOEP02649 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.2□□□□□ -2.06
APOEP02649 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.2□□□□□ -2.06
APOEP02649 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.2□□□□□ -2.06
APOEP02649 AC015688.2-201ENST00000584523 262 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC105224.1-201ENST00000587055 421 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.2□□□□□ -2.06
APOEP02649 AC068313.1-201ENST00000604028 1008 ntBASIC2.2□□□□□ -2.06
APOEP02649 AL121917.1-203ENST00000605534 577 ntBASIC2.2□□□□□ -2.06
APOEP02649 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC004852.3-201ENST00000614131 326 ntBASIC2.2□□□□□ -2.06
APOEP02649 RMST_10.1-201ENST00000616309 154 ntBASIC2.2□□□□□ -2.06
APOEP02649 AC098657.3-201ENST00000620434 263 ntBASIC2.2□□□□□ -2.06
APOEP02649 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
APOEP02649 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
APOEP02649 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.2□□□□□ -2.06
APOEP02649 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.2□□□□□ -2.06
APOEP02649 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOEP02649 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
APOEP02649 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOEP02649 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.2□□□□□ -2.06
APOEP02649 RNU6-115P-201ENST00000364310 107 ntBASIC2.19□□□□□ -2.06
APOEP02649 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
APOEP02649 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
APOEP02649 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
APOEP02649 MIR325-201ENST00000385260 98 ntBASIC2.19□□□□□ -2.06
APOEP02649 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.19□□□□□ -2.06
APOEP02649 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.19□□□□□ -2.06
APOEP02649 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.19□□□□□ -2.06
APOEP02649 AL118520.1-201ENST00000450770 291 ntBASIC2.19□□□□□ -2.06
APOEP02649 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.19□□□□□ -2.06
APOEP02649 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.19□□□□□ -2.06
APOEP02649 RNU6-420P-201ENST00000458780 107 ntBASIC2.19□□□□□ -2.06
APOEP02649 RPL30P9-201ENST00000465586 330 ntBASIC2.19□□□□□ -2.06
APOEP02649 MTND4LP3-201ENST00000468320 276 ntBASIC2.19□□□□□ -2.06
APOEP02649 RPS29P21-201ENST00000496272 170 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC084024.2-201ENST00000503480 791 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.19□□□□□ -2.06
APOEP02649 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.19□□□□□ -2.06
APOEP02649 ATP5F1P5-201ENST00000526403 760 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC124293.1-201ENST00000530034 493 ntBASIC2.19□□□□□ -2.06
APOEP02649 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.19□□□□□ -2.06
APOEP02649 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.19□□□□□ -2.06
APOEP02649 NIFKP8-201ENST00000560500 874 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.19□□□□□ -2.06
APOEP02649 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.19□□□□□ -2.06
APOEP02649 MIR3945-201ENST00000581853 98 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC103710.4-201ENST00000609301 899 ntBASIC2.19□□□□□ -2.06
APOEP02649 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.19□□□□□ -2.06
APOEP02649 AC006213.4-201ENST00000616184 634 ntBASIC2.19□□□□□ -2.06
APOEP02649 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
APOEP02649 AC073308.1-201ENST00000623696 305 ntBASIC2.19□□□□□ -2.06
APOEP02649 OR5H6-203ENST00000642105 978 ntBASIC2.19□□□□□ -2.06
APOEP02649 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms