Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR4719-201ENST00000585233 84 ntBASIC3.48□□□□□ -1.85
LDLRP01130 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.48□□□□□ -1.85
LDLRP01130 AL031176.1-201ENST00000604554 466 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC068276.1-201ENST00000605793 379 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC091965.4-201ENST00000607691 587 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.48□□□□□ -1.85
LDLRP01130 PLCE1P1-201ENST00000622094 305 ntBASIC3.48□□□□□ -1.85
LDLRP01130 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AL732372.2-225ENST00000642124 456 ntBASIC3.48□□□□□ -1.85
LDLRP01130 AC092447.10-201ENST00000620607 1652 ntBASIC3.48□□□□□ -1.85
LDLRP01130 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.48□□□□□ -1.85
LDLRP01130 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDLRP01130 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 RNA5SP295-201ENST00000362655 121 ntBASIC3.47□□□□□ -1.85
LDLRP01130 RNU6-335P-201ENST00000364563 113 ntBASIC3.47□□□□□ -1.85
LDLRP01130 RNU4-91P-201ENST00000364778 135 ntBASIC3.47□□□□□ -1.85
LDLRP01130 Y_RNA.554-201ENST00000384672 102 ntBASIC3.47□□□□□ -1.85
LDLRP01130 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LDLRP01130 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDLRP01130 RPS7P13-201ENST00000413955 498 ntBASIC3.47□□□□□ -1.85
LDLRP01130 TOMM22P1-201ENST00000418578 312 ntBASIC3.47□□□□□ -1.85
LDLRP01130 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.47□□□□□ -1.85
LDLRP01130 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.47□□□□□ -1.85
LDLRP01130 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.47□□□□□ -1.85
LDLRP01130 AP000797.1-201ENST00000478870 387 ntBASIC3.47□□□□□ -1.85
LDLRP01130 AC004924.1-201ENST00000480160 781 ntBASIC3.47□□□□□ -1.85
LDLRP01130 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AP004371.1-201ENST00000525240 214 ntBASIC3.47□□□□□ -1.85
LDLRP01130 OR5B10P-201ENST00000532869 642 ntBASIC3.47□□□□□ -1.85
LDLRP01130 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.47□□□□□ -1.85
LDLRP01130 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AC011602.1-201ENST00000546484 331 ntBASIC3.47□□□□□ -1.85
LDLRP01130 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.47□□□□□ -1.85
LDLRP01130 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 AC012065.4-201ENST00000602445 679 ntBASIC3.47□□□□□ -1.85
LDLRP01130 SNORA62.6-201ENST00000606322 83 ntBASIC3.47□□□□□ -1.85
LDLRP01130 AC090517.2-201ENST00000614966 680 ntBASIC3.47□□□□□ -1.85
LDLRP01130 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.47□□□□□ -1.85
LDLRP01130 AC025048.6-202ENST00000627667 438 ntBASIC3.47□□□□□ -1.85
LDLRP01130 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDLRP01130 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDLRP01130 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDLRP01130 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
LDLRP01130 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LDLRP01130 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 FGF7P2-201ENST00000332473 296 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RNU6-55P-201ENST00000411092 107 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RNU6-954P-201ENST00000411355 107 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 SSXP1-201ENST00000453640 473 ntBASIC3.46□□□□□ -1.86
LDLRP01130 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RPL21P104-201ENST00000464143 478 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AC021382.1-201ENST00000483523 359 ntBASIC3.46□□□□□ -1.86
LDLRP01130 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 AC017037.2-201ENST00000513850 890 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RNU6-718P-201ENST00000516166 105 ntBASIC3.46□□□□□ -1.86
LDLRP01130 RNA5SP164-201ENST00000516533 110 ntBASIC3.46□□□□□ -1.86
LDLRP01130 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 ADI1P3-201ENST00000549509 470 ntBASIC3.46□□□□□ -1.86
LDLRP01130 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 MIR4528-201ENST00000577763 90 ntBASIC3.46□□□□□ -1.86
LDLRP01130 OR4K8P-201ENST00000578842 1048 ntBASIC3.46□□□□□ -1.86
LDLRP01130 MIR5187-201ENST00000583479 76 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AL356055.1-201ENST00000602528 446 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AC006254.3-201ENST00000603353 884 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AC004067.1-201ENST00000608733 700 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AC006023.2-201ENST00000609916 167 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AL589743.7-201ENST00000612637 233 ntBASIC3.46□□□□□ -1.86
LDLRP01130 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
LDLRP01130 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.46□□□□□ -1.86
LDLRP01130 AL356585.4-201ENST00000623078 1229 ntBASIC3.46□□□□□ -1.86
LDLRP01130 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms