Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HSPE1P7-201ENST00000604681 321 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC007619.2-201ENST00000605743 379 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC002550.2-201ENST00000621246 394 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AL356596.1-201ENST00000624230 379 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AL159972.1-201ENST00000625150 448 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC243829.7-201ENST00000633081 225 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
PDGFBP01127 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PDGFBP01127 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
PDGFBP01127 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFBP01127 AC104454.1-201ENST00000421341 1401 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
PDGFBP01127 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFBP01127 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFBP01127 RNU6-777P-201ENST00000364265 104 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 Y_RNA.234-201ENST00000364409 97 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 RNU6-621P-201ENST00000364752 109 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 RNU6-359P-201ENST00000365466 108 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 CD24P4-201ENST00000382840 243 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFBP01127 RN7SKP285-201ENST00000410137 318 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AL592148.1-201ENST00000413568 445 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
PDGFBP01127 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 MTND1P26-201ENST00000440488 538 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 TRIM60P18-201ENST00000441518 828 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFBP01127 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFBP01127 MTND1P9-201ENST00000453775 944 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AL031183.1-201ENST00000457667 207 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC068587.2-201ENST00000478386 781 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 RPL31P60-201ENST00000478450 367 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFBP01127 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDGFBP01127 AC093677.1-201ENST00000514414 678 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 SCGB1D5P-201ENST00000515134 247 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFBP01127 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC079600.2-201ENST00000550076 130 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
PDGFBP01127 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.11□□□□□ -1.91
PDGFBP01127 AC131159.1-201ENST00000621854 213 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AP000676.3-201ENST00000623299 569 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 AC120349.3-201ENST00000624377 529 ntBASIC3.11□□□□□ -1.91
PDGFBP01127 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.11□□□□□ -1.91
PDGFBP01127 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDGFBP01127 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PDGFBP01127 AL161781.1-201ENST00000354277 403 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 U3.12-201ENST00000364498 214 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDGFBP01127 AL590084.2-201ENST00000401481 382 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 PIGPP2-201ENST00000411569 458 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AL953862.1-201ENST00000423016 168 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AL022400.1-201ENST00000423946 935 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFBP01127 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFBP01127 RPL7P5-201ENST00000471472 736 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 HSPE1P6-201ENST00000479457 291 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFBP01127 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.1□□□□□ -1.91
PDGFBP01127 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 AC023050.2-201ENST00000544968 387 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFBP01127 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 AP001429.1-201ENST00000602568 530 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.1□□□□□ -1.91
PDGFBP01127 AL592221.1-201ENST00000605266 382 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.1□□□□□ -1.91
PDGFBP01127 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PDGFBP01127 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
PDGFBP01127 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.91
PDGFBP01127 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDGFBP01127 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PDGFBP01127 SNORD113-6-201ENST00000363345 75 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MIR196B-201ENST00000384852 84 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MIR184-201ENST00000384962 84 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 MIR504-201ENST00000385065 83 ntBASIC3.09□□□□□ -1.91
PDGFBP01127 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms